RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
DENND4A-205ENST00000562540 TMX2Q9Y320 296 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 FAM227AF5H4B4 570 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 PSMD9O00233 223 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 UBXN7O94888 489 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 MT-CO3P00414 261 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 MYBP10242 640 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 CYP2C9P11712 490 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 HTR1BP28222 390 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 THBS4P35443 961 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 COPB1P53618 953 aaKnown RBP3.83□□□□□ -1.8
DENND4A-205ENST00000562540 UCP3P55916 312 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 RPS13P62277 151 aaKnown RBP3.83□□□□□ -1.8
DENND4A-205ENST00000562540 RAB1AP62820 205 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 PLS1Q14651 629 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 ZIK1Q3SY52 487 aaPredicted RBP3.83□□□□□ -1.8
DENND4A-205ENST00000562540 HSP90AB2PQ58FF8 381 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 TMTC4Q5T4D3 741 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 PPP4R4Q6NUP7 873 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 ZNF549Q6P9A3 640 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 Q6ZTC4 211 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 ZNF280BQ86YH2 543 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 PPP1R35Q8TAP8 253 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 TRMOQ9BU70 441 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 FAM204AQ9H8W3 233 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 SARS2Q9NP81 518 aaKnown RBP3.83□□□□□ -1.8
DENND4A-205ENST00000562540 PRDM11Q9NQV5 511 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 CNNM1Q9NRU3 951 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 C1orf112Q9NSG2 853 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 NOTCH4Q99466 2003 aa3.83□□□□□ -1.8
DENND4A-205ENST00000562540 MYO1CO00159 1063 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 MARCH6O60337 910 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 CNOT3O75175 753 aaKnown RBP3.82□□□□□ -1.8
DENND4A-205ENST00000562540 TGFB3P10600 412 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 CTSAP10619 480 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 GKP32189 559 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 DGKEP52429 567 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 PRKAG1P54619 331 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 RHDQ02161 417 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 CFHR1Q03591 330 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 LMAN2Q12907 356 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 LARS2Q15031 903 aaKnown RBP3.82□□□□□ -1.8
DENND4A-205ENST00000562540 MGAT5BQ3V5L5 792 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 KHDC1LQ5JSQ8 128 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 OVCH2Q7RTZ1 564 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 C14orf80Q86SX3 495 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 LIX1LQ8IVB5 337 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 ADHFE1Q8IWW8 467 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 CELF5Q8N6W0 485 aaKnown RBP3.82□□□□□ -1.8
DENND4A-205ENST00000562540 TTC8Q8TAM2 541 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 TMEM171Q8WVE6 324 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 RSPRY1Q96DX4 576 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 ZFYVE19Q96K21 471 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 C17orf80Q9BSJ5 609 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 B3GNT5Q9BYG0 378 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 ARMT1Q9H993 441 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 GABBR1Q9UBS5 961 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 PCDHA6Q9UN73 950 aa3.82□□□□□ -1.8
DENND4A-205ENST00000562540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.82□□□□□ -1.8
DENND4A-205ENST00000562540 KRT86O43790 486 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 PMPCBO75439 489 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 XRCC6P12956 609 aaKnown RBP eCLIP3.81□□□□□ -1.8
DENND4A-205ENST00000562540 KCNA3P22001 575 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 MT3P25713 68 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 WNT3P56703 355 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 KRTAP10-5P60370 271 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 NKX6-1P78426 367 aaPredicted RBP3.81□□□□□ -1.8
DENND4A-205ENST00000562540 KRT81Q14533 505 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 SEC23BQ15437 767 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 ANO6Q4KMQ2 910 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 ZNF585BQ52M93 769 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 DENND2CQ68D51 928 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 DCDC5Q6ZRR9 648 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 C18orf65Q6ZTR6 163 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 PTCHD4Q6ZW05 846 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 USP43Q70EL4 1123 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 MESP1Q9BRJ9 268 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 TMEM60Q9H2L4 133 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 SNX15Q9NRS6 342 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 LPAR3Q9UBY5 353 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 STAP2Q9UGK3 403 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 ICKQ9UPZ9 632 aa3.81□□□□□ -1.8
DENND4A-205ENST00000562540 FRMPD2Q68DX3 1309 aaPredicted RBP3.8□□□□□ -1.8
DENND4A-205ENST00000562540 A0A1W2PPL8 197 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 EME2A4GXA9 379 aaPredicted RBP3.8□□□□□ -1.8
DENND4A-205ENST00000562540 CAPN8A6NHC0 703 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 LACTBL1A8MY62 500 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 TUSC2O75896 110 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 APEHP13798 732 aaKnown RBP3.8□□□□□ -1.8
DENND4A-205ENST00000562540 SLC11A2P49281 568 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 MTX1Q13505 466 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 FGL2Q14314 439 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 GBX1Q14549 363 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 CC2D1BQ5T0F9 858 aaKnown RBP3.8□□□□□ -1.8
DENND4A-205ENST00000562540 NPNTQ6UXI9 565 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 RANBP10Q6VN20 620 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 PELI3Q8N2H9 469 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 PLBD2Q8NHP8 589 aa3.8□□□□□ -1.8
DENND4A-205ENST00000562540 MAFAQ8NHW3 353 aaPredicted RBP3.8□□□□□ -1.8
DENND4A-205ENST00000562540 MPLKIPQ8TAP9 179 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms