RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 TEKT4Q8WW24 435 aa14.94□□□□□ -0.02
COMMD4-205ENST00000562310 CENPIQ92674 756 aaPredicted RBP14.94□□□□□ -0.02
COMMD4-205ENST00000562310 CFAP57Q96MR6 1250 aa14.94□□□□□ -0.02
COMMD4-205ENST00000562310 C11orf84Q9BUA3 381 aaPredicted RBP14.94□□□□□ -0.02
COMMD4-205ENST00000562310 VN1R3Q9BXE9 311 aa14.94□□□□□ -0.02
COMMD4-205ENST00000562310 FBXO44Q9H4M3 255 aa14.94□□□□□ -0.02
COMMD4-205ENST00000562310 NGRNQ9NPE2 291 aaKnown RBP14.94□□□□□ -0.02
COMMD4-205ENST00000562310 RBM12Q9NTZ6 932 aaKnown RBP14.94□□□□□ -0.02
COMMD4-205ENST00000562310 TMEM51Q9NW97 253 aa14.94□□□□□ -0.02
COMMD4-205ENST00000562310 COMMD8Q9NX08 183 aa14.94□□□□□ -0.02
COMMD4-205ENST00000562310 HSFX1Q9UBD0 423 aa14.94□□□□□ -0.02
COMMD4-205ENST00000562310 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.94□□□□□ -0.02
COMMD4-205ENST00000562310 USP18Q9UMW8 372 aa14.94□□□□□ -0.02
COMMD4-205ENST00000562310 V9GYY5 206 aaPredicted RBP14.94□□□□□ -0.02
COMMD4-205ENST00000562310 TARSL2A2RTX5 802 aaKnown RBP14.93□□□□□ -0.02
COMMD4-205ENST00000562310 TRUB2O95900 331 aaKnown RBP14.93□□□□□ -0.02
COMMD4-205ENST00000562310 NDUFV1P49821 464 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 SULT1E1P49888 294 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 SLC5A3P53794 718 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 EPHB4P54760 987 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 KRT17Q04695 432 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 C15orf59Q2T9L4 293 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-205ENST00000562310 BOLA3Q53S33 107 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 C8orf74Q6P047 294 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 PRSS55Q6UWB4 352 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-205ENST00000562310 TAS1R1Q7RTX1 841 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 VSIG1Q86XK7 387 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 DEFB106AQ8N104 65 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 ARHGAP18Q8N392 663 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 ARFGAP1Q8N6T3 406 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 CLP1Q92989 425 aaKnown RBP14.93□□□□□ -0.02
COMMD4-205ENST00000562310 SPATA17Q96L03 361 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 RUNDC3BQ96NL0 473 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 SLITRK1Q96PX8 696 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 RAD9AQ99638 391 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 SLITRK6Q9H5Y7 841 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.93□□□□□ -0.02
COMMD4-205ENST00000562310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.93□□□□□ -0.02
COMMD4-205ENST00000562310 SSX2IPQ9Y2D8 614 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 EFR3BQ9Y2G0 817 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 RWDD3Q9Y3V2 267 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 CDY1Q9Y6F8 540 aa14.93□□□□□ -0.02
COMMD4-205ENST00000562310 GREB1Q4ZG55 1949 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 LRRD1A4D1F6 860 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 TNFRSF10BO14763 440 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 CAPN9O14815 690 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 FSCN2O14926 492 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 MDM4O15151 490 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 RTN3O95197 1032 aaPredicted RBP14.92□□□□□ -0.02
COMMD4-205ENST00000562310 USP17L7P0C7H9 530 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 HAPLN1P10915 354 aaPredicted RBP14.92□□□□□ -0.02
COMMD4-205ENST00000562310 TCF4P15884 667 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 ATP2A2P16615 1042 aaKnown RBP14.92□□□□□ -0.02
COMMD4-205ENST00000562310 MCM3P25205 808 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 ARPP19P56211 112 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 ATP11AP98196 1134 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 ROR1Q01973 937 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 CDO1Q16878 200 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 DCAF6Q58WW2 860 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 TFDP3Q5H9I0 405 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 TPGS2Q68CL5 300 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 NUP93Q8N1F7 819 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 NT5C3BQ969T7 300 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 NPY6RQ99463 290 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 OSBPL8Q9BZF1 889 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 ZWILCHQ9H900 591 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 HOMER3Q9NSC5 361 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 MAFFQ9ULX9 164 aa14.92□□□□□ -0.02
COMMD4-205ENST00000562310 YJEFN3A6XGL0 299 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 ZNF487B1APH4 448 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 E7ENQ6 273 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 PHF2O75151 1096 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 ENDOD1O94919 500 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 SYN1P17600 705 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 IL1R2P27930 398 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 CHRNA3P32297 505 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 RDXP35241 583 aaKnown RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 TUFMP49411 452 aaKnown RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 AIF1P55008 147 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 HDAC4P56524 1084 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 PDK2Q15119 407 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 CYP1B1Q16678 543 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 AADACL2Q6P093 401 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 RSPO2Q6UXX9 243 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 SPOCD1Q6ZMY3 1216 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 RNF19BQ6ZMZ0 732 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 BHLHA9Q7RTU4 235 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 BNIPLQ7Z465 357 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 PSTKQ8IV42 348 aaKnown RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 MAP7D3Q8IWC1 876 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 C12orf50Q8NA57 414 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 ATAD1Q8NBU5 361 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 CMASQ8NFW8 434 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 PGAP3Q96FM1 320 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 PGLYRP2Q96PD5 576 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 AP1M1Q9BXS5 423 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 CXXC1Q9P0U4 656 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 FNIP2Q9P278 1114 aa14.91□□□□□ -0.02
COMMD4-205ENST00000562310 AFF4Q9UHB7 1163 aaKnown RBP14.91□□□□□ -0.02
COMMD4-205ENST00000562310 PCSK1NQ9UHG2 260 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms