RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ADAM23O75077 832 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 KCNK5O95279 499 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 GRIA2P42262 883 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TUBP50607 506 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ZACNQ401N2 412 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ATL3Q6DD88 541 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TTC30AQ86WT1 665 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 BBS7Q8IWZ6 715 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 FRMD1Q8N878 549 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SLC2A14Q8TDB8 520 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 RLN3Q8WXF3 142 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CSNK1G1Q9HCP0 422 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 EXOC1Q9NV70 894 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 RCOR1Q9UKL0 485 aa17.69■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 C4orf47A7E2U8 309 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 NR3C1P04150 777 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PDIA4P13667 645 aaKnown RBP17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TNFRSF4P43489 277 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ASPAP45381 313 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 NDST1P52848 882 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 GAD2Q05329 585 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ST3GAL2Q16842 350 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SGSM1Q2NKQ1 1148 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HSF5Q4G112 596 aaPredicted RBP17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 C1orf220Q5T0J3 134 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SPOPLQ6IQ16 392 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CYP2U1Q7Z449 544 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 NAT16Q8N8M0 369 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 C12orf29Q8N999 325 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 OTUB2Q96DC9 234 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 DUSP9Q99956 384 aaKnown RBP17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 COMMD8Q9NX08 183 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ANGPTL2Q9UKU9 493 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CFAP45Q9UL16 551 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SH3BP1Q9Y3L3 701 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TPRP12270 2363 aaKnown RBP17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ABCA7Q8IZY2 2146 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 THADAQ6YHU6 1953 aa17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TNRC6BQ9UPQ9 1833 aaKnown RBP17.68■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PDXKO00764 312 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HOXC11O43248 304 aaPredicted RBP17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TULP3O75386 442 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ALDH1A2O94788 518 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 IRF1P10914 325 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PFKFB1P16118 471 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 P2RY2P41231 377 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 DHPSP49366 369 aaPredicted RBP17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 MAP3K7CLP57077 242 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PSAPL1Q6NUJ1 521 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SV2AQ7L0J3 742 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TMEM25Q86YD3 366 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HSCBQ8IWL3 235 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CRYBG2Q8N1P7 616 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 WHAMMQ8TF30 809 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CHAMP1Q96JM3 812 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 POLMQ9NP87 494 aaPredicted RBP17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SPHK2Q9NRA0 654 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 FAM49BQ9NUQ9 324 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HCN2Q9UL51 889 aa17.67■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 USP24Q9UPU5 2620 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 A0A1B0GVL5 298 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 KHNYNO15037 678 aaKnown RBP17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TRIM24O15164 1050 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 GREM1O60565 184 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TLR5O60602 858 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ASS1P00966 412 aaKnown RBP17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 RPN1P04843 607 aaKnown RBP17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HSP90AA1P07900 732 aaKnown RBP17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 P4HA1P13674 534 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 SHC2P98077 582 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 EOGTQ5NDL2 527 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 GPRIN1Q7Z2K8 1008 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 UNC93AQ86WB7 457 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TMC2Q8TDI7 906 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HMGB4Q8WW32 186 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TAF4BQ92750 862 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TWNKQ96RR1 684 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 NACA2Q9H009 215 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 BCCIPQ9P287 314 aaKnown RBP eCLIP17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 MBD1Q9UIS9 605 aaPredicted RBP17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PLXND1Q9Y4D7 1925 aa17.66■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 MAP1BP46821 2468 aaKnown RBP17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CACNA1BQ00975 2339 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TCRBV21S2A2A0A5A6 115 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TBC1D3BA6NDS4 549 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CDX4O14627 284 aaPredicted RBP17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 GIPC1O14908 333 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 IKBKBO14920 756 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 TBX18O95935 607 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 HLA-DRAP01903 254 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ADORA2BP29275 332 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PIK3CAP42336 1068 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 PTGER3P43115 390 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 ANO4Q32M45 955 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 MAP7D1Q3KQU3 841 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 BTBD8Q5XKL5 378 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CEP135Q66GS9 1140 aa17.65■□□□□ 0.42
VPS9D1-AS1-201ENST00000562298 CLEC20AQ6ZU45 233 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms