RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 ZNF354CQ86Y25 554 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 DNAJC10Q8IXB1 793 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 SLC15A3Q8IY34 581 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 SMAP1Q8IYB5 467 aaPredicted RBP7.35□□□□□ -1.23
SMG1-204ENST00000561940 SPARTQ8N0X7 666 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 STT3BQ8TCJ2 826 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 ZBTB45Q96K62 511 aaPredicted RBP7.35□□□□□ -1.23
SMG1-204ENST00000561940 ISCA1Q9BUE6 129 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 ITM2CQ9NQX7 267 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 SNX14Q9Y5W7 946 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 ADM5C9JUS6 153 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 M0R3H8 397 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 IPO5O00410 1097 aaKnown RBP7.34□□□□□ -1.23
SMG1-204ENST00000561940 MGST3O14880 152 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 PCDH17O14917 1159 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 USP1O94782 785 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 GYS1P13807 737 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 SIM1P81133 766 aaPredicted RBP7.34□□□□□ -1.23
SMG1-204ENST00000561940 E2F2Q14209 437 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 TAF5Q15542 800 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 TIGD6Q17RP2 521 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 ERCC6LQ2NKX8 1250 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 DEPDC1Q5TB30 811 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 KAZNQ674X7 775 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 SULT6B1Q6IMI4 303 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 MRNIPQ6NTE8 343 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 TRAPPC12Q8WVT3 735 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 TPSD1Q9BZJ3 242 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 TRIM5Q9C035 493 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 FAM83DQ9H4H8 585 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 EPS8L2Q9H6S3 715 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 FOXJ2Q9P0K8 574 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 VPS51Q9UID3 782 aa7.34□□□□□ -1.23
SMG1-204ENST00000561940 ZAR1LA6NP61 321 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 PPM1DO15297 605 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 TRIAP1O43715 76 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 COQ9O75208 318 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 VNN1O95497 513 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 NPPBP16860 134 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 YY1P25490 414 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 NANOS3P60323 173 aaKnown RBP7.33□□□□□ -1.24
SMG1-204ENST00000561940 FHL3Q13643 280 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 PRKG1Q13976 671 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 LY6KQ17RY6 165 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 PRR16Q569H4 304 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 ARL6IP4Q66PJ3 421 aaKnown RBP7.33□□□□□ -1.24
SMG1-204ENST00000561940 ABLIM2Q6H8Q1 611 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 SIMC1Q8NDZ2 872 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 ATG4AQ8WYN0 398 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 FAM136AQ96C01 138 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 OSBPL9Q96SU4 736 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 KATNAL1Q9BW62 490 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 ACTRT3Q9BYD9 372 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 AMBRA1Q9C0C7 1298 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 TMEM8AQ9HCN3 771 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 IL17RBQ9NRM6 502 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMG1-204ENST00000561940 DTNAQ9Y4J8 743 aa7.33□□□□□ -1.24
SMG1-204ENST00000561940 VWC2LB2RUY7 222 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 RHOP08100 348 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 RARRES1P49788 294 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 PGDP52209 483 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 FOXO1Q12778 655 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 GPS1Q13098 491 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 STRIP1Q5VSL9 837 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 ICE2Q659A1 982 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 CAGE1Q8TC20 777 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 FAM227BQ96M60 508 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 MLXIPQ9HAP2 919 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 ZBTB26Q9HCK0 441 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 DNAJB11Q9UBS4 358 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 LPAR3Q9UBY5 353 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 TLK1Q9UKI8 766 aa7.32□□□□□ -1.24
SMG1-204ENST00000561940 OVOL3O00110 214 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 FCHO1O14526 889 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 DHRS4L1P0CG22 281 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 KLRK1P26718 216 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 UQCRC1P31930 480 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 PDE6CP51160 858 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 PNLIPRP1P54315 467 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 NSUN2Q08J23 767 aaKnown RBP eCLIP7.31□□□□□ -1.24
SMG1-204ENST00000561940 EIF2B5Q13144 721 aaKnown RBP7.31□□□□□ -1.24
SMG1-204ENST00000561940 CERCAMQ5T4B2 595 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 SFRP4Q6FHJ7 346 aaPredicted RBP7.31□□□□□ -1.24
SMG1-204ENST00000561940 GATAD2AQ86YP4 633 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 CRAMP1Q96RY5 1269 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 PAGR1Q9BTK6 254 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 ALG13Q9NP73 1137 aaKnown RBP7.31□□□□□ -1.24
SMG1-204ENST00000561940 ST3GAL5Q9UNP4 418 aa7.31□□□□□ -1.24
SMG1-204ENST00000561940 SRGAP2BP0DMP2 458 aa7.3□□□□□ -1.24
SMG1-204ENST00000561940 BCAT1P54687 386 aa7.3□□□□□ -1.24
SMG1-204ENST00000561940 PEG10Q86TG7 708 aaKnown RBP7.3□□□□□ -1.24
SMG1-204ENST00000561940 ARHGEF25Q86VW2 580 aa7.3□□□□□ -1.24
SMG1-204ENST00000561940 KRT73Q86Y46 540 aa7.3□□□□□ -1.24
SMG1-204ENST00000561940 ABRAQ8N0Z2 381 aa7.3□□□□□ -1.24
SMG1-204ENST00000561940 GALNT15Q8N3T1 639 aa7.3□□□□□ -1.24
SMG1-204ENST00000561940 SLC9A6Q92581 669 aa7.3□□□□□ -1.24
SMG1-204ENST00000561940 RILPL2Q969X0 211 aa7.3□□□□□ -1.24
SMG1-204ENST00000561940 GCC1Q96CN9 775 aa7.3□□□□□ -1.24
SMG1-204ENST00000561940 GRAMD1AQ96CP6 724 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms