RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 SMAPO00193 183 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 PAPSS1O43252 624 aaPredicted RBP15.22■□□□□ 0.03
CRTC3-210ENST00000560927 ZWINTO95229 277 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 SNAI1O95863 264 aaPredicted RBP15.22■□□□□ 0.03
CRTC3-210ENST00000560927 RBL1P28749 1068 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 HOXA11P31270 313 aaPredicted RBP15.22■□□□□ 0.03
CRTC3-210ENST00000560927 CCDC15Q0P6D6 951 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 SNAPC2Q13487 334 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 CLEC4CQ8WTT0 213 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 EMID1Q96A84 441 aaPredicted RBP15.22■□□□□ 0.03
CRTC3-210ENST00000560927 TBC1D31Q96DN5 1066 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 CYTH2Q99418 400 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 EIF2AQ9BY44 585 aaKnown RBP15.22■□□□□ 0.03
CRTC3-210ENST00000560927 MAGEB5Q9BZ81 275 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 MIS12Q9H081 205 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 GJD2Q9UKL4 321 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 PLXNA1Q9UIW2 1896 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 RBM47A0AV96 593 aaKnown RBP15.21■□□□□ 0.03
CRTC3-210ENST00000560927 CCNB1P14635 433 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 YARSP54577 528 aaKnown RBP15.21■□□□□ 0.03
CRTC3-210ENST00000560927 YWHAGP61981 247 aaKnown RBP eCLIP15.21■□□□□ 0.03
CRTC3-210ENST00000560927 PRPF39Q86UA1 669 aaKnown RBP15.21■□□□□ 0.03
CRTC3-210ENST00000560927 CCDC125Q86Z20 511 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 MAGEC3Q8TD91 643 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 SLC35F5Q8WV83 523 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 C10orf82Q8WW14 230 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 SERAC1Q96JX3 654 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 SLC4A5Q9BY07 1137 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 DPEP3Q9H4B8 488 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 ALG13Q9NP73 1137 aaKnown RBP15.21■□□□□ 0.03
CRTC3-210ENST00000560927 SETD4Q9NVD3 440 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 STK38LQ9Y2H1 464 aa15.21■□□□□ 0.03
CRTC3-210ENST00000560927 DPYSL4O14531 572 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 APOL1O14791 398 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 UNC5CO95185 931 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 SMPD1P17405 629 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 SDC4P31431 198 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 GBP2P32456 591 aaPredicted RBP15.21■□□□□ 0.02
CRTC3-210ENST00000560927 ATXN1P54253 815 aaKnown RBP15.21■□□□□ 0.02
CRTC3-210ENST00000560927 HDAC4P56524 1084 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 SLC6A3Q01959 620 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 PTK7Q13308 1070 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 PPP6R3Q5H9R7 873 aaPredicted RBP15.21■□□□□ 0.02
CRTC3-210ENST00000560927 NT5DC4Q86YG4 428 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 FAM49AQ9H0Q0 323 aaPredicted RBP15.21■□□□□ 0.02
CRTC3-210ENST00000560927 CDHR5Q9HBB8 845 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 USH1CQ9Y6N9 552 aa15.21■□□□□ 0.02
CRTC3-210ENST00000560927 CHADO15335 359 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 BCAR1P56945 870 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 FAAP100Q0VG06 881 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 RIPK1Q13546 671 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 PDK2Q15119 407 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 PREPLQ4J6C6 727 aaPredicted RBP15.2■□□□□ 0.02
CRTC3-210ENST00000560927 BOLA3Q53S33 107 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 TMEM110Q86TL2 294 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 MAP7D3Q8IWC1 876 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 CCDC33Q8N5R6 958 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 PTPRN2Q92932 1015 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 CYLDQ9NQC7 956 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 FAM155BO75949 473 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 ATP2A2P16615 1042 aaKnown RBP15.2■□□□□ 0.02
CRTC3-210ENST00000560927 YWHAZP63104 245 aaKnown RBP15.2■□□□□ 0.02
CRTC3-210ENST00000560927 ZNF200P98182 395 aaPredicted RBP15.2■□□□□ 0.02
CRTC3-210ENST00000560927 PLEKHG4Q58EX7 1191 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 WLSQ5T9L3 541 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 SLC9A4Q6AI14 798 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 SLC44A1Q8WWI5 657 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 CFAP36Q96G28 342 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 LRRC37BQ96QE4 947 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 ETNK1Q9HBU6 452 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 NPHS2Q9NP85 383 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 PAK5Q9P286 719 aa15.2■□□□□ 0.02
CRTC3-210ENST00000560927 ADCY6O43306 1168 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 ZBED1O96006 694 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 C1QAP02745 245 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 MMP3P08254 477 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 TSHRP16473 764 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 TARSP26639 723 aaKnown RBP15.19■□□□□ 0.02
CRTC3-210ENST00000560927 OVGP1Q12889 678 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 STILQ15468 1287 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 SEPT7Q16181 437 aaKnown RBP15.19■□□□□ 0.02
CRTC3-210ENST00000560927 SOWAHAQ2M3V2 549 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 TTC39CQ8N584 583 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 C7orf31Q8N865 590 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 OR6B3Q8NGW1 331 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 CCDC110Q8TBZ0 833 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 RTP4Q96DX8 246 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 SNX27Q96L92 541 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 TMEM237Q96Q45 408 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 ADAMTS10Q9H324 1103 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 PLAC1Q9HBJ0 212 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.19■□□□□ 0.02
CRTC3-210ENST00000560927 NUMBLQ9Y6R0 609 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 PDHXO00330 501 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 MT-ND3P03897 115 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 TGM2P21980 687 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 SETDB1Q15047 1291 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 LDLRAD1Q5T700 205 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 SH2D5Q6ZV89 423 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 ZNF410Q86VK4 478 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms