RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PMF1Q6P1K2 205 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 ZNF606Q8WXB4 792 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 WBP2Q969T9 261 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 CHFRQ96EP1 664 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 LTB4R2Q9NPC1 389 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 THG1LQ9NWX6 298 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 SMPD4Q9NXE4 827 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 PIAS3Q9Y6X2 628 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 SYCE3A1L190 88 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 TLR5O60602 858 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 LETM1O95202 739 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 TBX18O95935 607 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 MBL2P11226 248 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 ATP1A3P13637 1013 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 CLCN1P35523 988 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 GPD2P43304 727 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 SOX9P48436 509 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 RPL34P49207 117 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 TKTL1P51854 596 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 SLC8A3P57103 927 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 IQCB1Q15051 598 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 EML3Q32P44 896 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 FAM71AQ8IYT1 594 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 SCML4Q8N228 414 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 KIAA1958Q8N8K9 716 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 PJA1Q8NG27 643 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 OSCP1Q8WVF1 389 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 NDRG1Q92597 394 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 SECISBP2LQ93073 1101 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 LSM14BQ9BX40 385 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 OSBPL6Q9BZF3 934 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 ULBP1Q9BZM6 244 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 GANQ9H2C0 597 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 LINC00597Q9H2U6 94 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 EBF3Q9H4W6 596 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 PLCB1Q9NQ66 1216 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 CLIC5Q9NZA1 410 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 SIK3Q9Y2K2 1263 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 FHOD1Q9Y613 1164 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 HELZP42694 1942 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 WDFY4Q6ZS81 3184 aa16.07■□□□□ 0.16
SNRPA1-213ENST00000560856 M0QYV0 167 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 PES1O00541 588 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 GREM1O60565 184 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 ZBED1O96006 694 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 PNMA6AP0CW24 399 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 RARGP13631 454 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 UCHL3P15374 230 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 TARSP26639 723 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 CTHP32929 405 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 KLK7P49862 253 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 RUNX3Q13761 415 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 MEA1Q16626 185 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 ITPRIPL2Q3MIP1 535 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 DENND1BQ6P3S1 775 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 KLHDC10Q6PID8 442 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 TXNDC11Q6PKC3 985 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 ZNF852Q6ZMS4 543 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 CCDC105Q8IYK2 499 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 TTC8Q8TAM2 541 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 CSGALNACT1Q8TDX6 532 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 KLF16Q9BXK1 252 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 C8orf33Q9H7E9 229 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 CFAP97Q9P2B7 532 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 NUDT5Q9UKK9 219 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 SIT1Q9Y3P8 196 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 WNT6Q9Y6F9 365 aa16.06■□□□□ 0.16
SNRPA1-213ENST00000560856 MYO16Q9Y6X6 1858 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 CACNA1IQ9P0X4 2223 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 FAM170BA6NMN3 283 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 LGALS16A8MUM7 142 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 SPECC1L-ADORA2AF8WAN1 911 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 STK25O00506 426 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 MAN2B1O00754 1011 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 MDM4O15151 490 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 EPHB6O15197 1021 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 DCNP07585 359 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 GNA15P30679 374 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 PSEN1P49768 467 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 RGS7P49802 495 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 ZNF165P49910 485 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 ADIGQ0VDE8 80 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 DRAP1Q14919 205 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 CC2D1AQ6P1N0 951 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 RALGPS2Q86X27 583 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 PRSS33Q8NF86 280 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 CLDN23Q96B33 292 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 HSFY1Q96LI6 401 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 NELL2Q99435 816 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 LRRC4Q9HBW1 653 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 DUS2Q9NX74 493 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 CYTH4Q9UIA0 394 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 NAGPAQ9UK23 515 aa16.05■□□□□ 0.16
SNRPA1-213ENST00000560856 E2F8A0AVK6 867 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 YJEFN3A6XGL0 299 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 E7ENQ6 273 aa16.04■□□□□ 0.16
SNRPA1-213ENST00000560856 THAP12O43422 761 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms