RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 ZBBXA8MT70 800 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 RTN3O95197 1032 aaPredicted RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 GJB5O95377 273 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 TRUB2O95900 331 aaKnown RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 LTFP02788 710 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 GBP1P32455 592 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 GLUD2P49448 558 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 ZNF135P52742 658 aaPredicted RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 SLC5A3P53794 718 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 HTRA4P83105 476 aaPredicted RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 DSG1Q02413 1049 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 KRT17Q04695 432 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 TPGS2Q68CL5 300 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 FBXO38Q6PIJ6 1188 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 DDX53Q86TM3 631 aaKnown RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 COLGALT1Q8NBJ5 622 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 GRK7Q8WTQ7 553 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 HERVK_113Q902F9 699 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 NT5C3BQ969T7 300 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 PIWIL1Q96J94 861 aaKnown RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 SPATA17Q96L03 361 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 TMEM209Q96SK2 561 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 KRT12Q99456 494 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 LRRC1Q9BTT6 524 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 ACBD3Q9H3P7 528 aa12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 NGRNQ9NPE2 291 aaKnown RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 ABI2Q9NYB9 513 aaPredicted RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 RCOR3Q9P2K3 495 aaPredicted RBP12.37□□□□□ -0.43
AC087878.1-201ENST00000560709 LRRD1A4D1F6 860 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 MTMR11A4FU01 709 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 PIK3R2O00459 728 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 GRAP2O75791 330 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 ENDOD1O94919 500 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 URODP06132 367 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 ACRP10323 421 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 TNFRSF8P28908 595 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 GJC1P36383 396 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 TUFMP49411 452 aaKnown RBP12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 PSEN1P49768 467 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 SULT1E1P49888 294 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 CLCN6P51797 869 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 RBM10P98175 930 aaKnown RBP12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 LMNB2Q03252 620 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 PSMD5Q16401 504 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 CCDC142Q17RM4 750 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 RTP2Q5QGT7 225 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 TRNP1Q6NT89 227 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 SPOCD1Q6ZMY3 1216 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 SYDE1Q6ZW31 735 aaPredicted RBP12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 ZNF365Q70YC5 407 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 OTOP2Q7RTS6 562 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 CPNE8Q86YQ8 564 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 DEFB106AQ8N104 65 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 FIBCD1Q8N539 461 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 KCTD6Q8NC69 237 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 BADQ92934 168 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 SLCO2A1Q92959 643 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 CFAP57Q96MR6 1250 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 KCNK16Q96T55 309 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 NPY6RQ99463 290 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 AP1M1Q9BXS5 423 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 LRRC19Q9H756 370 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 SMARCAL1Q9NZC9 954 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 AFF4Q9UHB7 1163 aaKnown RBP12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 PCYOX1Q9UHG3 505 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 SCML2Q9UQR0 700 aa12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 UTP11Q9Y3A2 253 aaKnown RBP12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 MRPL42Q9Y6G3 142 aaKnown RBP12.36□□□□□ -0.43
AC087878.1-201ENST00000560709 hCG_1818297A0A087WSY0 165 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 NT5C1B-RDH14C9J2C7 533 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 TNFRSF10BO14763 440 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 ZNF189O75820 626 aaPredicted RBP12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 USP17L7P0C7H9 530 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 HAPLN1P10915 354 aaPredicted RBP12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 RALAP11233 206 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 KDELR1P24390 212 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 CYP2F1P24903 491 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 CDKN2BP42772 138 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 HDAC4P56524 1084 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 ATP11AP98196 1134 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 GPS2Q13227 327 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 MTA1Q13330 715 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 CUL1Q13616 776 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 TFDP2Q14188 446 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 TAF5Q15542 800 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 CCNG2Q16589 344 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 TAZQ16635 292 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 C15orf59Q2T9L4 293 aaPredicted RBP12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 ARL13BQ3SXY8 428 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 DCAF6Q58WW2 860 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 TMEM240Q5SV17 173 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 DRICH1Q6PGQ1 229 aaPredicted RBP12.35□□□□□ -0.43
AC087878.1-201ENST00000560709 SND1Q7KZF4 910 aaKnown RBP eCLIP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms