RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 HOXC11O43248 304 aaPredicted RBP17.67■□□□□ 0.42
HERC1-207ENST00000560316 COCHO43405 550 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 NDUFS2O75306 463 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 LDHAP00338 332 aaKnown RBP17.67■□□□□ 0.42
HERC1-207ENST00000560316 WARSP23381 471 aaKnown RBP17.67■□□□□ 0.42
HERC1-207ENST00000560316 L1TD1Q5T7N2 865 aaKnown RBP17.67■□□□□ 0.42
HERC1-207ENST00000560316 TMEM25Q86YD3 366 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 MARCH9Q86YJ5 346 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 BBS7Q8IWZ6 715 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 OR5B17Q8NGF7 314 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 WBP2Q969T9 261 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 ACCSQ96QU6 501 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 MMS19Q96T76 1030 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 CBWD1Q9BRT8 395 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 SCUBE2Q9NQ36 999 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 SUSD2Q9UGT4 822 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 PCOLCE2Q9UKZ9 415 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 SH3BP1Q9Y3L3 701 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 R3HCC1Q9Y3T6 440 aaKnown RBP17.67■□□□□ 0.42
HERC1-207ENST00000560316 NME7Q9Y5B8 376 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 RAD54BQ9Y620 910 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 PTPRJQ12913 1337 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 ASXL3Q9C0F0 2248 aa17.67■□□□□ 0.42
HERC1-207ENST00000560316 URB1O60287 2271 aaKnown RBP17.67■□□□□ 0.42
HERC1-207ENST00000560316 PTPRBP23467 1997 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 HELZ2Q9BYK8 2649 aaKnown RBP17.66■□□□□ 0.42
HERC1-207ENST00000560316 GNSP15586 552 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 GARTP22102 1010 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 PREPLQ4J6C6 727 aaPredicted RBP17.66■□□□□ 0.42
HERC1-207ENST00000560316 SYCP2LQ5T4T6 812 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 NUDT18Q6ZVK8 323 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 GLRX5Q86SX6 157 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 CHPFQ8IZ52 775 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 ADAM32Q8TC27 787 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 SETD7Q8WTS6 366 aaKnown RBP17.66■□□□□ 0.42
HERC1-207ENST00000560316 OTUB2Q96DC9 234 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 CRELD1Q96HD1 420 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 ANKRD36BP1Q96IX9 119 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 MRPL45Q9BRJ2 306 aaKnown RBP17.66■□□□□ 0.42
HERC1-207ENST00000560316 IL21RQ9HBE5 538 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 SPHK2Q9NRA0 654 aa17.66■□□□□ 0.42
HERC1-207ENST00000560316 GCNT3O95395 438 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 IRF1P10914 325 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 YWHAQP27348 245 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 CASP5P51878 434 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 GRAMD4Q6IC98 578 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 SDE2Q6IQ49 451 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 SYCP3Q8IZU3 236 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 FBXO32Q969P5 355 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 MRGPRX1Q96LB2 322 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 ZNF518BQ9C0D4 1074 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 DPEP3Q9H4B8 488 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 DNAJC17Q9NVM6 304 aaKnown RBP17.65■□□□□ 0.42
HERC1-207ENST00000560316 INTS13Q9NVM9 706 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 CHORDC1Q9UHD1 332 aaPredicted RBP17.65■□□□□ 0.42
HERC1-207ENST00000560316 STARD13Q9Y3M8 1113 aa17.65■□□□□ 0.42
HERC1-207ENST00000560316 CLDN5O00501 218 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 LONP1P36776 959 aaKnown RBP17.64■□□□□ 0.41
HERC1-207ENST00000560316 GNL1P36915 607 aaPredicted RBP17.64■□□□□ 0.41
HERC1-207ENST00000560316 WDR45BQ5MNZ6 344 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 KIAA1324Q6UXG2 1013 aaKnown RBP17.64■□□□□ 0.41
HERC1-207ENST00000560316 TMPRSS7Q7RTY8 843 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 GLIS3Q8NEA6 775 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 OR6B3Q8NGW1 331 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 FOXJ1Q92949 421 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 GABRG3Q99928 467 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 FGFBP2Q9BYJ0 223 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 ZDHHC5Q9C0B5 715 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 SNX25Q9H3E2 840 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 CCSER2Q9H7U1 834 aa17.64■□□□□ 0.41
HERC1-207ENST00000560316 KIAA1522Q9P206 1035 aaPredicted RBP17.64■□□□□ 0.41
HERC1-207ENST00000560316 ASH1LQ9NR48 2969 aaKnown RBP17.64■□□□□ 0.41
HERC1-207ENST00000560316 MEI4A8MW99 385 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 PRRT4C9JH25 899 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 TNNC2P02585 160 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 PRB1P04280 392 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 PTPN1P18031 435 aaKnown RBP17.63■□□□□ 0.41
HERC1-207ENST00000560316 CYP4F3Q08477 520 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 HECTD3Q5T447 861 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 NUP93Q8N1F7 819 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 ZCCHC9Q8N567 271 aaKnown RBP17.63■□□□□ 0.41
HERC1-207ENST00000560316 B3GNT5Q9BYG0 378 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 TRIM9Q9C026 710 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 MIR1-1HGQ9H1L0 117 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 TOR4AQ9NXH8 423 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 CACNA2D2Q9NY47 1150 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 SEL1LQ9UBV2 794 aa17.63■□□□□ 0.41
HERC1-207ENST00000560316 A0A1B0GTW7 788 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 GOLGA8CPA6NN73 597 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 WASH3PC4AMC7 463 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 NEDD8-MDP1E9PL57 170 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 H3BQV1 296 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 ATXN1LP0C7T5 689 aaKnown RBP17.62■□□□□ 0.41
HERC1-207ENST00000560316 CD6P30203 668 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 USP49Q70CQ1 688 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 GPD1LQ8N335 351 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 PDZD8Q8NEN9 1154 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 SCAMP5Q8TAC9 235 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 SCFD1Q8WVM8 642 aa17.62■□□□□ 0.41
HERC1-207ENST00000560316 DNAJC19Q96DA6 116 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms