RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 E7ENQ6 273 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 PRAMEF12O95522 483 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 OAS1P00973 400 aaKnown RBP22.88■■□□□ 1.25
SNX1-210ENST00000560260 CDC25BP30305 580 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 ACADSBP45954 432 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 ARHGAP15Q53QZ3 475 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 C2CD6Q53TS8 623 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 TJAP1Q5JTD0 557 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 FAM78AQ5JUQ0 283 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 TRIM72Q6ZMU5 477 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 TC2NQ8N9U0 490 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 SLITRK6Q9H5Y7 841 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 CCSER2Q9H7U1 834 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 TRPC7Q9HCX4 862 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 SEPT11Q9NVA2 429 aaKnown RBP22.88■■□□□ 1.25
SNX1-210ENST00000560260 TAS2R14Q9NYV8 317 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 GDE1Q9NZC3 331 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 NR2E1Q9Y466 385 aa22.88■■□□□ 1.25
SNX1-210ENST00000560260 GOLGA6L3A6NEY3 463 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 C19orf67A6NJJ6 358 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 AKR1B15C9JRZ8 316 aaPredicted RBP22.87■■□□□ 1.25
SNX1-210ENST00000560260 DDX3XO00571 662 aaKnown RBP eCLIP22.87■■□□□ 1.25
SNX1-210ENST00000560260 OLFM2O95897 454 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 ABL1P00519 1130 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 SERPING1P05155 500 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 PPP3CCP48454 512 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 CENPCQ03188 943 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 TDRD12Q587J7 1177 aaKnown RBP22.87■■□□□ 1.25
SNX1-210ENST00000560260 FAM183BPQ6ZVS7 135 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 SCUBE3Q8IX30 993 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 ZDHHC14Q8IZN3 488 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 ARL14EPQ8N8R7 260 aaPredicted RBP22.87■■□□□ 1.25
SNX1-210ENST00000560260 OR8K1Q8NGG5 319 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 SLC30A5Q8TAD4 765 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 ZSCAN18Q8TBC5 510 aaPredicted RBP22.87■■□□□ 1.25
SNX1-210ENST00000560260 ACSF2Q96CM8 615 aaPredicted RBP22.87■■□□□ 1.25
SNX1-210ENST00000560260 RSPRY1Q96DX4 576 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 ASB16Q96NS5 453 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 CYP2S1Q96SQ9 504 aa22.87■■□□□ 1.25
SNX1-210ENST00000560260 SMG9Q9H0W8 520 aaKnown RBP22.87■■□□□ 1.25
SNX1-210ENST00000560260 TLR8Q9NR97 1041 aaKnown RBP22.87■■□□□ 1.25
SNX1-210ENST00000560260 TPM1P09493 284 aa22.86■■□□□ 1.25
SNX1-210ENST00000560260 DDX6P26196 483 aaKnown RBP eCLIP22.86■■□□□ 1.25
SNX1-210ENST00000560260 YWHAGP61981 247 aaKnown RBP eCLIP22.86■■□□□ 1.25
SNX1-210ENST00000560260 NOX5Q96PH1 765 aa22.86■■□□□ 1.25
SNX1-210ENST00000560260 RNF38Q9H0F5 515 aa22.86■■□□□ 1.25
SNX1-210ENST00000560260 CD320Q9NPF0 282 aa22.86■■□□□ 1.25
SNX1-210ENST00000560260 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.86■■□□□ 1.25
SNX1-210ENST00000560260 NAGPAQ9UK23 515 aa22.86■■□□□ 1.25
SNX1-210ENST00000560260 NUDT5Q9UKK9 219 aa22.86■■□□□ 1.25
SNX1-210ENST00000560260 HELZP42694 1942 aaKnown RBP22.86■■□□□ 1.25
SNX1-210ENST00000560260 COCHO43405 550 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 FBXO21O94952 628 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 TNFAIP3P21580 790 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 GABRB2P47870 512 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 PTP4A2Q12974 167 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 HTR4Q13639 388 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 TAF5Q15542 800 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 PARM1Q6UWI2 310 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 OLFML1Q6UWY5 402 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 MMS22LQ6ZRQ5 1243 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 DNAAF5Q86Y56 855 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 CNGA4Q8IV77 575 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 CMTM8Q8IZV2 173 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 RIN3Q8TB24 985 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 IPO4Q8TEX9 1081 aaKnown RBP22.85■■□□□ 1.25
SNX1-210ENST00000560260 IRGQQ8WZA9 623 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 FGF14Q92915 247 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 C11orf70Q9BRQ4 267 aa22.85■■□□□ 1.25
SNX1-210ENST00000560260 ZFP37Q9Y6Q3 630 aaPredicted RBP22.85■■□□□ 1.25
SNX1-210ENST00000560260 ANHXE9PGG2 379 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 MDM4O15151 490 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 TLR5O60602 858 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 TBX18O95935 607 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 FYNP06241 537 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 RARGP13631 454 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 MMP8P22894 467 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 VIPR2P41587 438 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 TUBP50607 506 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 ZXDBP98169 803 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 HECTD3Q5T447 861 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 ERICH1Q86X53 443 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 XYLT1Q86Y38 959 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 ARID3BQ8IVW6 561 aaPredicted RBP22.84■■□□□ 1.25
SNX1-210ENST00000560260 SPC24Q8NBT2 197 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 ADAMTS19Q8TE59 1207 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 RSAD2Q8WXG1 361 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 SMARCD2Q92925 531 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 RPP25Q9BUL9 199 aaKnown RBP22.84■■□□□ 1.25
SNX1-210ENST00000560260 CLIC5Q9NZA1 410 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 LIMD1Q9UGP4 676 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 CCL26Q9Y258 94 aa22.84■■□□□ 1.25
SNX1-210ENST00000560260 TRAV19A0A0A6YYK7 116 aa22.83■■□□□ 1.25
SNX1-210ENST00000560260 SOBPA7XYQ1 873 aa22.83■■□□□ 1.25
SNX1-210ENST00000560260 ASGR2P07307 311 aa22.83■■□□□ 1.25
SNX1-210ENST00000560260 BSPRYQ5W0U4 402 aa22.83■■□□□ 1.25
SNX1-210ENST00000560260 TANGO2Q6ICL3 276 aa22.83■■□□□ 1.25
SNX1-210ENST00000560260 OR6B2Q6IFH4 312 aa22.83■■□□□ 1.25
SNX1-210ENST00000560260 MON1BQ7L1V2 547 aa22.83■■□□□ 1.25
SNX1-210ENST00000560260 PHF13Q86YI8 300 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms