RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 SGO2Q562F6 1265 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 PIGZQ86VD9 579 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 SCML4Q8N228 414 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 SLC35F5Q8WV83 523 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 KCTD13Q8WZ19 329 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 TFAP2BQ92481 460 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 ATOH1Q92858 354 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-213ENST00000560175 ATP2A3Q93084 1043 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 ZSWIM1Q9BR11 485 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 KLF16Q9BXK1 252 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-213ENST00000560175 PRMT8Q9NR22 394 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-213ENST00000560175 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMAD3-213ENST00000560175 DACH1Q9UI36 760 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 TSPAN16Q9UKR8 245 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 WNT6Q9Y6F9 365 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 SLC9A3R1O14745 358 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-213ENST00000560175 ABL1P00519 1130 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 TDGF1P13385 188 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 PLA2G4AP47712 749 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 IFNAR2P48551 515 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 RPL34P49207 117 aaKnown RBP13.92□□□□□ -0.18
SMAD3-213ENST00000560175 GALK1P51570 392 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 BCAT1P54687 386 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 PDE4CQ08493 712 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 MTAPQ13126 283 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 PON2Q15165 354 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 STILQ15468 1287 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 DPY19L2P1Q6NXN4 242 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 TMEM270Q6UE05 265 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 HTR3DQ70Z44 454 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 RRAGAQ7L523 313 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 ENOSF1Q7L5Y1 443 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 BHLHA9Q7RTU4 235 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 SPEM1Q8N4L4 309 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 CPA6Q8N4T0 437 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 TTC8Q8TAM2 541 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 OTUB2Q96DC9 234 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 FAM81BQ96LP2 452 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 INTS2Q9H0H0 1204 aaKnown RBP13.92□□□□□ -0.18
SMAD3-213ENST00000560175 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
SMAD3-213ENST00000560175 TBC1D14Q9P2M4 693 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 ZFHX2Q9C0A1 2572 aaPredicted RBP13.92□□□□□ -0.18
SMAD3-213ENST00000560175 ATG2BQ96BY7 2078 aa13.92□□□□□ -0.18
SMAD3-213ENST00000560175 RIF1Q5UIP0 2472 aaKnown RBP13.91□□□□□ -0.18
SMAD3-213ENST00000560175 A0A0A0MRY4 1105 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 A0A1W2PQH9 124 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 TULP2O00295 520 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 CYP26A1O43174 497 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 LAMTOR5O43504 91 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 GABBR2O75899 941 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 TBX18O95935 607 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 MBL2P11226 248 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-213ENST00000560175 ATP5C1P36542 298 aaKnown RBP13.91□□□□□ -0.18
SMAD3-213ENST00000560175 MRE11P49959 708 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 BST2Q10589 180 aaKnown RBP13.91□□□□□ -0.18
SMAD3-213ENST00000560175 NR1H3Q13133 447 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 LRRC32Q14392 662 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 MEA1Q16626 185 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 MAN2A1Q16706 1144 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 MIIPQ5JXC2 388 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 FSTL4Q6MZW2 842 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 TRIM65Q6PJ69 517 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 RHBDF2Q6PJF5 856 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 ZBTB44Q8NCP5 570 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 ENOX1Q8TC92 643 aaKnown RBP13.91□□□□□ -0.18
SMAD3-213ENST00000560175 SEMA4AQ9H3S1 761 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 FAM86C1Q9NVL1 165 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 SPATA6Q9NWH7 488 aaPredicted RBP13.91□□□□□ -0.18
SMAD3-213ENST00000560175 CFAP97Q9P2B7 532 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMAD3-213ENST00000560175 PCDHB4Q9Y5E5 795 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 KIAA1549LQ6ZVL6 1849 aa13.91□□□□□ -0.18
SMAD3-213ENST00000560175 GOLGA6L22H0YM25 854 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 NFATC1O95644 943 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 SETSIPP0DME0 302 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 RARGP13631 454 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 SLC9A1P19634 815 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 DRD1P21728 446 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 PON1P27169 355 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 HOXA6P31267 233 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 OPRD1P41143 372 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 SLC8A3P57103 927 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 EXOC3L4Q17RC7 722 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 GOLGA7BQ2TAP0 167 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 GBP6Q6ZN66 633 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 RBBP8NLQ8NC74 664 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-213ENST00000560175 EZH1Q92800 747 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-213ENST00000560175 WBP2Q969T9 261 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 FAM126AQ9BYI3 521 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-213ENST00000560175 UBE2TQ9NPD8 197 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-213ENST00000560175 RBM12Q9NTZ6 932 aaKnown RBP13.9□□□□□ -0.18
SMAD3-213ENST00000560175 SMPD4Q9NXE4 827 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 HESX1Q9UBX0 185 aa13.9□□□□□ -0.18
SMAD3-213ENST00000560175 CHURC1-FNTBB4DL54 471 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 LILRB5O75023 590 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 ZBED1O96006 694 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 CYP17A1P05093 508 aa13.89□□□□□ -0.19
SMAD3-213ENST00000560175 CD19P15391 556 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms