RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MSTO1Q9BUK6 570 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 TMLHEQ9NVH6 421 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 KLK13Q9UKR3 277 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 PCDHB5Q9Y5E4 795 aa21.81■■□□□ 1.08
PSEN1-225ENST00000560005 EXOC3O60645 756 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 TADA3O75528 432 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 CSH1P0DML2 217 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 CSH2P0DML3 217 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 MAPK8P45983 427 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 SEC13P55735 322 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 TBX2Q13207 712 aaPredicted RBP21.8■■□□□ 1.08
PSEN1-225ENST00000560005 EML3Q32P44 896 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 C2orf27AQ580R0 203 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 TRIM61Q5EBN2 209 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 CD302Q8IX05 232 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 FAM186BQ8IYM0 893 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 DCP1BQ8IZD4 617 aaKnown RBP21.8■■□□□ 1.08
PSEN1-225ENST00000560005 XXYLT1Q8NBI6 393 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 CCDC112Q8NEF3 446 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 MDGA1Q8NFP4 955 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 USP33Q8TEY7 942 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 EEF2KMTQ96G04 330 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 SLC22A12Q96S37 553 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 PI4K2AQ9BTU6 479 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 SLC32A1Q9H598 525 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 KIAA1586Q9HCI6 787 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 TRPC7Q9HCX4 862 aa21.8■■□□□ 1.08
PSEN1-225ENST00000560005 EVLQ9UI08 416 aaPredicted RBP21.8■■□□□ 1.08
PSEN1-225ENST00000560005 CPSF3Q9UKF6 684 aaKnown RBP21.8■■□□□ 1.08
PSEN1-225ENST00000560005 A0A0B4J269 797 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 ANTXRLA6NF34 631 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 PIGRP01833 764 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 KRT13P13646 458 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 TAF6P49848 677 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 ENPEPQ07075 957 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 LMAN2Q12907 356 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 MIIPQ5JXC2 388 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 INTS8Q75QN2 995 aaKnown RBP21.79■■□□□ 1.08
PSEN1-225ENST00000560005 TTC30AQ86WT1 665 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 LRRC8AQ8IWT6 810 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 CCDC26Q8TAB7 109 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 CYP2S1Q96SQ9 504 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 ZKSCAN5Q9Y2L8 839 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 MSRB2Q9Y3D2 182 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 PCNX2A6NKB5 2137 aa21.79■■□□□ 1.08
PSEN1-225ENST00000560005 SMG1Q96Q15 3661 aaKnown RBP21.78■■□□□ 1.08
PSEN1-225ENST00000560005 SPAARA0A1B0GVQ0 90 aa21.78■■□□□ 1.08
PSEN1-225ENST00000560005 CKMP06732 381 aa21.78■■□□□ 1.08
PSEN1-225ENST00000560005 MSNP26038 577 aaKnown RBP21.78■■□□□ 1.08
PSEN1-225ENST00000560005 USP4Q13107 963 aa21.78■■□□□ 1.08
PSEN1-225ENST00000560005 FIGNQ5HY92 759 aa21.78■■□□□ 1.08
PSEN1-225ENST00000560005 ARMCX6Q7L4S7 300 aa21.78■■□□□ 1.08
PSEN1-225ENST00000560005 CNGA4Q8IV77 575 aa21.78■■□□□ 1.08
PSEN1-225ENST00000560005 DERAQ9Y315 318 aa21.78■■□□□ 1.08
PSEN1-225ENST00000560005 GON4LQ3T8J9 2241 aa21.78■■□□□ 1.08
PSEN1-225ENST00000560005 LOC400499M0QZD8 3231 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 TRAV19A0A0A6YYK7 116 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 AKR1B15C9JRZ8 316 aaPredicted RBP21.77■■□□□ 1.08
PSEN1-225ENST00000560005 K7EQS6 105 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 LDHAP00338 332 aaKnown RBP21.77■■□□□ 1.08
PSEN1-225ENST00000560005 USP17L7P0C7H9 530 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 CYP2J2P51589 502 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 SIM1P81133 766 aaPredicted RBP21.77■■□□□ 1.08
PSEN1-225ENST00000560005 NR1H3Q13133 447 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 DDR2Q16832 855 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 SLC39A4Q6P5W5 647 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 EFCAB13Q8IY85 973 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 CCDC33Q8N5R6 958 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 RLN3Q8WXF3 142 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 NUSAP1Q9BXS6 441 aaKnown RBP21.77■■□□□ 1.08
PSEN1-225ENST00000560005 EDEM3Q9BZQ6 932 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 HSPBP1Q9NZL4 362 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 UXTQ9UBK9 157 aaPredicted RBP21.77■■□□□ 1.08
PSEN1-225ENST00000560005 MMP17Q9ULZ9 603 aa21.77■■□□□ 1.08
PSEN1-225ENST00000560005 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 STX10O60499 249 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 AFPP02771 609 aaKnown RBP21.76■■□□□ 1.07
PSEN1-225ENST00000560005 ENGP17813 658 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 ACOT2P49753 483 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 TSPY1Q01534 308 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 CRY1Q16526 586 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 TSR1Q2NL82 804 aaKnown RBP21.76■■□□□ 1.07
PSEN1-225ENST00000560005 LPCAT2Q7L5N7 544 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 TMEFF1Q8IYR6 380 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 PCMTD1Q96MG8 357 aaPredicted RBP21.76■■□□□ 1.07
PSEN1-225ENST00000560005 LINC00597Q9H2U6 94 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 TMEM74BQ9NUR3 256 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 DPP3Q9NY33 737 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 C2CD2Q9Y426 696 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 STYXL1Q9Y6J8 313 aa21.76■■□□□ 1.07
PSEN1-225ENST00000560005 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.76■■□□□ 1.07
PSEN1-225ENST00000560005 PTPRDP23468 1912 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 GTPBP10A4D1E9 387 aaKnown RBP21.75■■□□□ 1.07
PSEN1-225ENST00000560005 NOL4O94818 638 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 HNRNPLP14866 589 aaKnown RBP eCLIP21.75■■□□□ 1.07
PSEN1-225ENST00000560005 OPRD1P41143 372 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 PTGER3P43115 390 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 MCCD1P59942 119 aaPredicted RBP21.75■■□□□ 1.07
PSEN1-225ENST00000560005 KCNH2Q12809 1159 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 NFE2Q16621 373 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms