RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 DRG1Q9Y295 367 aaKnown RBP18.62■□□□□ 0.57
SNX1-208ENST00000559844 MRPL42Q9Y6G3 142 aaKnown RBP18.62■□□□□ 0.57
SNX1-208ENST00000559844 LCHNA4D1U4 455 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 LIASO43766 372 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 RARGP13631 454 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 KRT10P13645 584 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 MYOGP15173 224 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 PCK1P35558 622 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 ZNF143P52747 638 aaPredicted RBP18.61■□□□□ 0.57
SNX1-208ENST00000559844 IFFO1Q0D2I5 559 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 AGBL2Q5U5Z8 902 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 DENND2CQ68D51 928 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 TXNRD3NBQ6F5E7 133 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 ZDHHC17Q8IUH5 632 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 C12orf29Q8N999 325 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 CNPY3Q9BT09 278 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 SNX25Q9H3E2 840 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 CWH43Q9H720 699 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 ZWILCHQ9H900 591 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 NEU2Q9Y3R4 380 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.61■□□□□ 0.57
SNX1-208ENST00000559844 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.61■□□□□ 0.57
SNX1-208ENST00000559844 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.61■□□□□ 0.57
SNX1-208ENST00000559844 E5RJQ4 531 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 DESP17661 470 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 ADCY8P40145 1251 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 CLCNKBP51801 687 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 SKOR1P84550 965 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 EMC10Q5UCC4 262 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 LEKR1Q6ZMV7 388 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 FAM183BPQ6ZVS7 135 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 GSTA5Q7RTV2 222 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 HOOK3Q86VS8 718 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 CRYBG2Q8N1P7 616 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 FIBCD1Q8N539 461 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 ARFGAP1Q8N6T3 406 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 TTC13Q8NBP0 860 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 APPL2Q8NEU8 664 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 SP7Q8TDD2 431 aaPredicted RBP18.61■□□□□ 0.57
SNX1-208ENST00000559844 SLC4A5Q9BY07 1137 aa18.61■□□□□ 0.57
SNX1-208ENST00000559844 C3orf70A6NLC5 250 aaPredicted RBP18.6■□□□□ 0.57
SNX1-208ENST00000559844 NDC80O14777 642 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 FAM163BP0C2L3 166 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 IVDP26440 423 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 LRPAP1P30533 357 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 PBX3P40426 434 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 OR1G1P47890 313 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 BYSLQ13895 437 aaKnown RBP18.6■□□□□ 0.57
SNX1-208ENST00000559844 RHBDF2Q6PJF5 856 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 KDM7AQ6ZMT4 941 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 TMEM110Q86TL2 294 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 OR2W6PQ8NHA6 318 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 UROC1Q96N76 676 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 NCAPGQ9BPX3 1015 aa18.6■□□□□ 0.57
SNX1-208ENST00000559844 C2CD4BA6NLJ0 364 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 DPYSL4O14531 572 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 SHOX2O60902 331 aaPredicted RBP18.59■□□□□ 0.57
SNX1-208ENST00000559844 TRUB2O95900 331 aaKnown RBP18.59■□□□□ 0.57
SNX1-208ENST00000559844 KDELR1P24390 212 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 GNL1P36915 607 aaPredicted RBP18.59■□□□□ 0.57
SNX1-208ENST00000559844 BCAR1P56945 870 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 TAZQ16635 292 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 UPP1Q16831 310 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 KCTD16Q68DU8 428 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 CEP128Q6ZU80 1094 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 TRMT10CQ7L0Y3 403 aaKnown RBP18.59■□□□□ 0.57
SNX1-208ENST00000559844 LIMS2Q7Z4I7 341 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 TTC30AQ86WT1 665 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 ARFGAP2Q8N6H7 521 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 TOP6BLQ8N6T0 577 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 SLC35F5Q8WV83 523 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 CAPS2Q9BXY5 557 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 CYLDQ9NQC7 956 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 FAM49BQ9NUQ9 324 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 ANAPC5Q9UJX4 755 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 PRG3Q9Y2Y8 225 aaPredicted RBP18.59■□□□□ 0.57
SNX1-208ENST00000559844 PCDHA11Q9Y5I1 949 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 HUS1O60921 280 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 IL1R2P27930 398 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 MIPP30301 263 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 RPL9P32969 192 aaKnown RBP18.59■□□□□ 0.57
SNX1-208ENST00000559844 ACTN2P35609 894 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 PBX2P40425 430 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 SLC11A1P49279 550 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 ALDH7A1P49419 539 aaKnown RBP18.59■□□□□ 0.57
SNX1-208ENST00000559844 ITGA8P53708 1063 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 KBTBD7Q8WVZ9 684 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 RXFP2Q8WXD0 754 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 NKD2Q969F2 451 aaPredicted RBP18.59■□□□□ 0.57
SNX1-208ENST00000559844 ACSF2Q96CM8 615 aaPredicted RBP18.59■□□□□ 0.57
SNX1-208ENST00000559844 TNIP3Q96KP6 325 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 TMEM175Q9BSA9 504 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 USP18Q9UMW8 372 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 ZNF148Q9UQR1 794 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 NME7Q9Y5B8 376 aa18.59■□□□□ 0.57
SNX1-208ENST00000559844 TRIOBPQ9H2D6 2365 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 F8W810 466 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 NRP1O14786 923 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 B3GAT3O94766 335 aa18.58■□□□□ 0.56
SNX1-208ENST00000559844 ALDH2P05091 517 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms