RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 ATP2C2O75185 946 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 PRPF40AO75400 957 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 EPN2O95208 641 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 IL18RAPO95256 599 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 BMP15O95972 392 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 KRT18P05783 430 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 SPINK2P20155 84 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 PTMSP20962 102 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 LMO2P25791 158 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 DDX6P26196 483 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP3-215ENST00000559771 GJA4P35212 333 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 DEKP35659 375 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 TFAMQ00059 246 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 SMARCB1Q12824 385 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 USP4Q13107 963 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 ZNF268Q14587 947 aaPredicted RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 VEPH1Q14D04 833 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 ZNF77Q15935 545 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 SOWAHAQ2M3V2 549 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 EML3Q32P44 896 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 SV2CQ496J9 727 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 CFAP221Q4G0U5 840 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 L1TD1Q5T7N2 865 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 FAM171BQ6P995 826 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 METTL23Q86XA0 190 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 NT5DC4Q86YG4 428 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 DCP1BQ8IZD4 617 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 THEM5Q8N1Q8 247 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 LRRC52Q8N7C0 313 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 OR5B17Q8NGF7 314 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 KBTBD7Q8WVZ9 684 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 GAB3Q8WWW8 586 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 HPS3Q969F9 1004 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 TRMT2BQ96GJ1 504 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 ZC3H10Q96K80 434 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 GZF1Q9H116 711 aaPredicted RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 ARRDC1-AS1Q9H2J1 176 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 LINC00597Q9H2U6 94 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 SMOC1Q9H4F8 434 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 PDE11AQ9HCR9 933 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 ABCB6Q9NP58 842 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 CRTAC1Q9NQ79 661 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 OLFML3Q9NRN5 406 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 TDP1Q9NUW8 608 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 TMEM30AQ9NV96 361 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 GDAP2Q9NXN4 497 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 DDX43Q9NXZ2 648 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 MARK1Q9P0L2 795 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 SEL1LQ9UBV2 794 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 RAB23Q9ULC3 237 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 MAGED2Q9UNF1 606 aaPredicted RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 AGAP1Q9UPQ3 857 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 SMC3Q9UQE7 1217 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 SRPRBQ9Y5M8 271 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 TNRC6BQ9UPQ9 1833 aaKnown RBP6.22□□□□□ -1.41
USP3-215ENST00000559771 SPEGQ15772 3267 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 ZZEF1O43149 2961 aa6.21□□□□□ -1.41
USP3-215ENST00000559771 ACACBO00763 2458 aa6.21□□□□□ -1.41
USP3-215ENST00000559771 MAP1BP46821 2468 aaKnown RBP6.21□□□□□ -1.41
USP3-215ENST00000559771 DCLK1O15075 740 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 RPP40O75818 363 aaKnown RBP6.21□□□□□ -1.42
USP3-215ENST00000559771 PRPF6O94906 941 aaKnown RBP6.21□□□□□ -1.42
USP3-215ENST00000559771 ZNF806P0C7X5 589 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 CSH1P0DML2 217 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 CSH2P0DML3 217 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 HNRNPLP14866 589 aaKnown RBP eCLIP6.21□□□□□ -1.425e-6■□□□□ 8.4
USP3-215ENST00000559771 TCF3P15923 654 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 GARTP22102 1010 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 ABCD1P33897 745 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 AVPR1AP37288 418 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 OPRD1P41143 372 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 PNPLA4P41247 253 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 LIMK1P53667 647 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 CACNA2D1P54289 1103 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 FAM160A1Q05DH4 1040 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 MESP2Q0VG99 397 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 MTF1Q14872 753 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 POSTNQ15063 836 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 NFE2Q16621 373 aaPredicted RBP6.21□□□□□ -1.42
USP3-215ENST00000559771 PLK5Q496M5 336 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 LMBRD2Q68DH5 695 aaPredicted RBP6.21□□□□□ -1.42
USP3-215ENST00000559771 TCEAL6Q6IPX3 200 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 SFTPA1Q8IWL2 248 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 HSCBQ8IWL3 235 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 TMEM86AQ8N2M4 240 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 CSGALNACT2Q8N6G5 542 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 TOP6BLQ8N6T0 577 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 OSCP1Q8WVF1 389 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 TCEAL3Q969E4 200 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 LOXL4Q96JB6 756 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 ZNF560Q96MR9 790 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 GCNAQ96QF7 691 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 ACCSQ96QU6 501 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 HHIPQ96QV1 700 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 USP28Q96RU2 1077 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 PANK2Q9BZ23 570 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 MTMR12Q9C0I1 747 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 ZMYND15Q9H091 742 aa6.21□□□□□ -1.42
USP3-215ENST00000559771 DUSP15Q9H1R2 295 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms