RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 TLR5O60602 858 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 RARGP13631 454 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 LCP1P13796 627 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 PFKLP17858 780 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 RPL34P49207 117 aaKnown RBP20.51■□□□□ 0.87
SHF-205ENST00000559566 SLC8A3P57103 927 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 TNK2Q07912 1038 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 TRIM68Q6AZZ1 485 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 DDX1Q92499 740 aaKnown RBP20.51■□□□□ 0.87
SHF-205ENST00000559566 PCMTD1Q96MG8 357 aaPredicted RBP20.51■□□□□ 0.87
SHF-205ENST00000559566 LRFN3Q9BTN0 628 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 KIF9Q9HAQ2 790 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 LRRC4Q9HBW1 653 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 CYLDQ9NQC7 956 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.51■□□□□ 0.87
SHF-205ENST00000559566 FBXL21Q9UKT6 434 aa20.51■□□□□ 0.87
SHF-205ENST00000559566 FAM170AA1A519 330 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 LEFTY2O00292 366 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 ZNF263O14978 683 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 CHADO15335 359 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 MED7O43513 233 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 GFPT2O94808 682 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 CAVIN2O95810 425 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 ZBED1O96006 694 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 MBL2P11226 248 aaPredicted RBP20.5■□□□□ 0.87
SHF-205ENST00000559566 CYP11B1P15538 503 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 TUBP50607 506 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 PTK2Q05397 1052 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 MTF1Q14872 753 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 NR1I3Q14994 352 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 TMEM31Q5JXX7 168 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 NOP9Q86U38 636 aaKnown RBP20.5■□□□□ 0.87
SHF-205ENST00000559566 NEK11Q8NG66 645 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 TTC8Q8TAM2 541 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 C1QTNF1Q9BXJ1 281 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 HPS4Q9NQG7 708 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 ARHGEF3Q9NR81 526 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 HEBP1Q9NRV9 189 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 GKN1Q9NS71 199 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 NAGPAQ9UK23 515 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 PCDHGC3Q9UN70 934 aa20.5■□□□□ 0.87
SHF-205ENST00000559566 YJEFN3A6XGL0 299 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 E7ENQ6 273 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 SERPINC1P01008 464 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 ARSAP15289 507 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 TCF3P15923 654 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 SOX5P35711 763 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 DAOAP59103 153 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 ZNF445P59923 1031 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 YWHAGP61981 247 aaKnown RBP eCLIP20.49■□□□□ 0.87
SHF-205ENST00000559566 MEA1Q16626 185 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 SLC44A4Q53GD3 710 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 TAF3Q5VWG9 929 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 CWF19L1Q69YN2 538 aaKnown RBP20.49■□□□□ 0.87
SHF-205ENST00000559566 SMYD5Q6GMV2 418 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 YAF2Q8IY57 180 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 RNF214Q8ND24 703 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 EPS8L1Q8TE68 723 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 SLC20A1Q8WUM9 679 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 HSFY1Q96LI6 401 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 FAM83CQ9BQN1 747 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 SLC4A5Q9BY07 1137 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 WNT6Q9Y6F9 365 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 MYO16Q9Y6X6 1858 aa20.49■□□□□ 0.87
SHF-205ENST00000559566 KIF26AQ9ULI4 1882 aaPredicted RBP20.48■□□□□ 0.87
SHF-205ENST00000559566 OTOL1A6NHN0 477 aaPredicted RBP20.48■□□□□ 0.87
SHF-205ENST00000559566 GOLGA6L19H0YKK7 550 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 SOX9P48436 509 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 PDE6CP51160 858 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 PDCLQ13371 301 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 ARHGAP29Q52LW3 1261 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 BMP8AQ7Z5Y6 402 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 SIX6OS1Q8N1H7 587 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 C1orf131Q8NDD1 294 aaKnown RBP20.48■□□□□ 0.87
SHF-205ENST00000559566 DNASE1L2Q92874 299 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 MIS12Q9H081 205 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 GTSE1Q9NYZ3 720 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 CFAP97Q9P2B7 532 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 NOCTQ9UK39 431 aaKnown RBP20.48■□□□□ 0.87
SHF-205ENST00000559566 MYH10P35580 1976 aa20.48■□□□□ 0.87
SHF-205ENST00000559566 PRR33A8MZF0 331 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 E5RJQ4 531 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 MMEP08473 750 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 CD72P21854 359 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 PBX1P40424 430 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 PFKPQ01813 784 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 MLF2Q15773 248 aaPredicted RBP20.47■□□□□ 0.87
SHF-205ENST00000559566 FILIP1LQ4L180 1135 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 SCML4Q8N228 414 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 BAP1Q92560 729 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 IRF7Q92985 503 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 PBXIP1Q96AQ6 731 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 CHFRQ96EP1 664 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 PIWIL1Q96J94 861 aaKnown RBP20.47■□□□□ 0.87
SHF-205ENST00000559566 CPXM1Q96SM3 734 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 KLF16Q9BXK1 252 aaPredicted RBP20.47■□□□□ 0.87
SHF-205ENST00000559566 LINC00597Q9H2U6 94 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 EBF3Q9H4W6 596 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 TRPV5Q9NQA5 729 aa20.47■□□□□ 0.87
SHF-205ENST00000559566 CNGB3Q9NQW8 809 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms