RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 MESP2Q0VG99 397 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 DPYDQ12882 1025 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 NFIL3Q16649 462 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 HSF5Q4G112 596 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-213ENST00000559399 LY6G5CQ5SRR4 150 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 SFTPA1Q8IWL2 248 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 ALLCQ8N6M5 410 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 C12orf29Q8N999 325 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 MDGA1Q8NFP4 955 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 TPSD1Q9BZJ3 242 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 SCAND2PQ9GZW5 306 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-213ENST00000559399 SMOC1Q9H4F8 434 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.8■□□□□ 0.127e-8■■■■■ 186.3
LRRC28-213ENST00000559399 RXFP3Q9NSD7 469 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 MAPK8IP1Q9UQF2 711 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 ATP6V1DQ9Y5K8 247 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 OBSL1O75147 1896 aa15.8■□□□□ 0.12
LRRC28-213ENST00000559399 A0A1W2PQ27 194 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 A0A1W2PQ64 194 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 A0A1W2PQD8 194 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 ANTXRLA6NF34 631 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 HOXC11O43248 304 aaPredicted RBP15.79■□□□□ 0.12
LRRC28-213ENST00000559399 TLR5O60602 858 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 BEST1O76090 585 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 ALDH1A2O94788 518 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 TRIM49P0CI25 452 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 TRIM49CP0CI26 452 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 CHRM1P11229 460 aaPredicted RBP15.79■□□□□ 0.12
LRRC28-213ENST00000559399 RPL13P26373 211 aaKnown RBP15.79■□□□□ 0.12
LRRC28-213ENST00000559399 CREB5Q02930 508 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 ENPEPQ07075 957 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 BTBD8Q5XKL5 378 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 KRBA2Q6ZNG9 492 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 BBS7Q8IWZ6 715 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 FAM186BQ8IYM0 893 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 GUF1Q8N442 669 aaKnown RBP15.79■□□□□ 0.12
LRRC28-213ENST00000559399 IL17RCQ8NAC3 791 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 TXNDC5Q8NBS9 432 aaKnown RBP15.79■□□□□ 0.12
LRRC28-213ENST00000559399 CCDC150Q8NCX0 1101 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 TAS1R2Q8TE23 839 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 NT5C1AQ9BXI3 368 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 NIF3L1Q9GZT8 377 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 CYP3A43Q9HB55 503 aa15.79■□□□□ 0.12
LRRC28-213ENST00000559399 TLR8Q9NR97 1041 aaKnown RBP15.79■□□□□ 0.12
LRRC28-213ENST00000559399 A0A0A0MRY4 1105 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 KLF8O95600 359 aaPredicted RBP15.78■□□□□ 0.12
LRRC28-213ENST00000559399 IRF1P10914 325 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 TIE1P35590 1138 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 PSMC2P35998 433 aaKnown RBP15.78■□□□□ 0.12
LRRC28-213ENST00000559399 TNFRSF4P43489 277 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 PGFP49763 221 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 PPP3CAQ08209 521 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 GOLGA8FQ08AF8 430 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 GOLGA8DPQ0D2H9 430 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 ANO4Q32M45 955 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 PREPLQ4J6C6 727 aaPredicted RBP15.78■□□□□ 0.12
LRRC28-213ENST00000559399 EOGTQ5NDL2 527 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 STPG1Q5TH74 334 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 PMS2CLQ68D20 193 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 TCEAL6Q6IPX3 200 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 CLEC20AQ6ZU45 233 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 GPRIN1Q7Z2K8 1008 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 TTC30AQ86WT1 665 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 ETFBKMTQ8IXQ9 262 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 TCEAL3Q969E4 200 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 JAKMIP2Q96AA8 810 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 TWNKQ96RR1 684 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 HNRNPABQ99729 332 aaKnown RBP15.78■□□□□ 0.12
LRRC28-213ENST00000559399 DNAI2Q9GZS0 605 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 MMRN2Q9H8L6 949 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 APOBEC3GQ9HC16 384 aaKnown RBP15.78■□□□□ 0.12
LRRC28-213ENST00000559399 PNPLA8Q9NP80 782 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 POLMQ9NP87 494 aaPredicted RBP15.78■□□□□ 0.12
LRRC28-213ENST00000559399 CYLDQ9NQC7 956 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 SPHK2Q9NRA0 654 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 INVSQ9Y283 1065 aa15.78■□□□□ 0.12
LRRC28-213ENST00000559399 BCLAF3A2AJT9 711 aaKnown RBP15.77■□□□□ 0.12
LRRC28-213ENST00000559399 TBC1D3BA6NDS4 549 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 SGK1O00141 431 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 CYP26A1O43174 497 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 TULP3O75386 442 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 CAVIN2O95810 425 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 HNRNPLP14866 589 aaKnown RBP eCLIP15.77■□□□□ 0.12
LRRC28-213ENST00000559399 CD58P19256 250 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 KIR2DL1P43626 348 aaPredicted RBP15.77■□□□□ 0.12
LRRC28-213ENST00000559399 ZCWPW2Q504Y3 356 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 TMEM92Q6UXU6 159 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 PHTF2Q8N3S3 785 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 NAT16Q8N8M0 369 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 WHAMMQ8TF30 809 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 CYFIP2Q96F07 1278 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 CCDC34Q96HJ3 373 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 CNTNAP3BQ96NU0 1288 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 CNTNAP3Q9BZ76 1288 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 GOLPH3LQ9H4A5 285 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 TMEM8AQ9HCN3 771 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 BCCIPQ9P287 314 aaKnown RBP eCLIP15.77■□□□□ 0.12
LRRC28-213ENST00000559399 DEC1Q9P2X7 70 aa15.77■□□□□ 0.12
LRRC28-213ENST00000559399 LSM7Q9UK45 103 aaKnown RBP15.77■□□□□ 0.12
LRRC28-213ENST00000559399 SCML2Q9UQR0 700 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms