RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 DEC1Q9P2X7 70 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 CHORDC1Q9UHD1 332 aaPredicted RBP17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 MSRB2Q9Y3D2 182 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 SH3BP1Q9Y3L3 701 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 HOXC11O43248 304 aaPredicted RBP17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 SERPINF2P08697 491 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 HOXB2P14652 356 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 PDCP20941 246 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 GFPT1Q06210 699 aaPredicted RBP17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 PSMD6Q15008 389 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 ANO4Q32M45 955 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 C10orf76Q5T2E6 689 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 HECTD3Q5T447 861 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 SLC36A4Q6YBV0 504 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 BBS7Q8IWZ6 715 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 TERB1Q8NA31 727 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 CCDC127Q96BQ5 260 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 KCNK16Q96T55 309 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 CCSER2Q9H7U1 834 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 CAPN10Q9HC96 672 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 SPHK2Q9NRA0 654 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 CALCOCO1Q9P1Z2 691 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 ADAMTS20P59510 1910 aa17.25■□□□□ 0.35
CDC42BPB-205ENST00000559245 EIF3DO15371 548 aaKnown RBP eCLIP17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 OPHN1O60890 802 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 WASP42768 502 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 MYL6P60660 151 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 ZNF33AQ06730 810 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 CYP24A1Q07973 514 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 TRPC3Q13507 836 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 SLC39A14Q15043 492 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 SNX30Q5VWJ9 437 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 NUDT18Q6ZVK8 323 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 TMEM25Q86YD3 366 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 SCAMP5Q8TAC9 235 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 ZNF507Q8TCN5 953 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 WBP2Q969T9 261 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 USP28Q96RU2 1077 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 TNMDQ9H2S6 317 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 AGPAT3Q9NRZ7 376 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 NXF1Q9UBU9 619 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 HCN2Q9UL51 889 aa17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 MORC2Q9Y6X9 1032 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-205ENST00000559245 ATP8B3O60423 1300 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 PLXNB3Q9ULL4 1909 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 H0Y626 953 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 TRIM24O15164 1050 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 CLIC2O15247 247 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 TGFB1I1O43294 461 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 TRIM16O95361 564 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 STAU1O95793 577 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 IRF1P10914 325 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 NTSR1P30989 418 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 CYP2J2P51589 502 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 FAM193AP78312 1265 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 CUL4AQ13619 759 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 EPM2AIP1Q7L775 607 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 RABEPKQ7Z6M1 372 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 FAM35AQ86V20 835 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 MIB1Q86YT6 1006 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 MINDY1Q8N5J2 469 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 XXYLT1Q8NBI6 393 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 ZNF516Q92618 1163 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 DUSP9Q99956 384 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 MED10Q9BTT4 135 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 TRIM9Q9C026 710 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 LRRC27Q9C0I9 530 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 XYLT2Q9H1B5 865 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 UPF2Q9HAU5 1272 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 IL37Q9NZH6 218 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 STARD13Q9Y3M8 1113 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 NBEAQ8NFP9 2946 aa17.23■□□□□ 0.35
CDC42BPB-205ENST00000559245 LAMA5O15230 3695 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 IGHV1OR15-9A0A0B4J2B8 117 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 A0A1W2PQF6 199 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 ARHGAP33O14559 1287 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 ATICP31939 592 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 RDXP35241 583 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 TUBP50607 506 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 SLC5A3P53794 718 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 RING1Q06587 406 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 EGFLAMQ63HQ2 1017 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 GRAMD4Q6IC98 578 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 LRSAM1Q6UWE0 723 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 PAQR9Q6ZVX9 377 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 SLC41A1Q8IVJ1 513 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 CHCHD4Q8N4Q1 142 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 OR2I1PQ8NGU4 316 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 GZF1Q9H116 711 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 SMYD3Q9H7B4 428 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 DMAP1Q9NPF5 467 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 KBTBD4Q9NVX7 518 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 GMIPQ9P107 970 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 CYP8B1Q9UNU6 501 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 LHX6Q9UPM6 363 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 PTPRBP23467 1997 aa17.22■□□□□ 0.35
CDC42BPB-205ENST00000559245 FAM92AA1XBS5 289 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 ZBTB24O43167 697 aaPredicted RBP17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 PHACTR2O75167 634 aa17.21■□□□□ 0.35
CDC42BPB-205ENST00000559245 ZNF217O75362 1048 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms