RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 DPH6Q7L8W6 267 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 APOBEC3FQ8IUX4 373 aaKnown RBP17.26■□□□□ 0.35
SPG11-215ENST00000559193 TUBB6Q9BUF5 446 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 R3HDMLQ9H3Y0 253 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 POPDC2Q9HBU9 364 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 TNFSF13BQ9Y275 285 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 COPEO14579 308 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 KCNN4O15554 427 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 HMGCRP04035 888 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 MYL2P10916 166 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 PDGFRAP16234 1089 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 PRKG1Q13976 671 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 CDO1Q16878 200 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 MAP1SQ66K74 1059 aaPredicted RBP17.26■□□□□ 0.35
SPG11-215ENST00000559193 RINLQ6ZS11 566 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 FAM183BPQ6ZVS7 135 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 PLD5Q8N7P1 536 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 PPM1NQ8N819 430 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPG11-215ENST00000559193 MICAL1Q8TDZ2 1067 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 RTP4Q96DX8 246 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 HEXIM2Q96MH2 286 aaKnown RBP17.26■□□□□ 0.35
SPG11-215ENST00000559193 GPATCH2LQ9NWQ4 482 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 PAK5Q9P286 719 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 KLF11O14901 512 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 GRAP2O75791 330 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 LMNAP02545 664 aaKnown RBP17.25■□□□□ 0.35
SPG11-215ENST00000559193 IL4RP24394 825 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 KRT72Q14CN4 511 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 CMPK2Q5EBM0 449 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 NCAPG2Q86XI2 1143 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 CTAGE3PQ8IX95 158 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.25■□□□□ 0.35
SPG11-215ENST00000559193 OXNAD1Q96HP4 312 aaPredicted RBP17.25■□□□□ 0.35
SPG11-215ENST00000559193 FAM237BA0A1B0GVD1 139 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 EIF4E1BA6NMX2 242 aaKnown RBP17.25■□□□□ 0.35
SPG11-215ENST00000559193 GYG2O15488 501 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 PRPSAP2O60256 369 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 STAG3L1P0CL83 205 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 VDRP11473 427 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 ATP6V1C1P21283 382 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 OR6B2Q6IFH4 312 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 PLPPR4Q7Z2D5 763 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 CAND1Q86VP6 1230 aaKnown RBP17.25■□□□□ 0.35
SPG11-215ENST00000559193 PQLC3Q8N755 202 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 MECRQ9BV79 373 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 SMYD2Q9NRG4 433 aa17.25■□□□□ 0.35
SPG11-215ENST00000559193 CORO1CQ9ULV4 474 aaPredicted RBP17.25■□□□□ 0.35
SPG11-215ENST00000559193 NOP56O00567 594 aaKnown RBP17.24■□□□□ 0.35
SPG11-215ENST00000559193 FCHO1O14526 889 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 RBL1P28749 1068 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 KRT81Q14533 505 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 ANO7Q6IWH7 933 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 APBB1IPQ7Z5R6 666 aaPredicted RBP17.24■□□□□ 0.35
SPG11-215ENST00000559193 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 TRPM4Q8TD43 1214 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 SPDL1Q96EA4 605 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 SPATC1LQ9H0A9 340 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 VRTNQ9H8Y1 702 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 CYP3A43Q9HB55 503 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 ARHGEF4Q9NR80 690 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 TAS2R1Q9NYW7 299 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 ZC3H7BQ9UGR2 993 aaKnown RBP17.24■□□□□ 0.35
SPG11-215ENST00000559193 ZNF180Q9UJW8 692 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 SOCS7O14512 581 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 MAP3K6O95382 1288 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 SNRPAP09012 282 aaKnown RBP17.24■□□□□ 0.35
SPG11-215ENST00000559193 PRKCHP24723 683 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 RXRBP28702 533 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 MRPS5P82675 430 aaKnown RBP17.24■□□□□ 0.35
SPG11-215ENST00000559193 KPNB1Q14974 876 aaKnown RBP17.24■□□□□ 0.35
SPG11-215ENST00000559193 ACSBG2Q5FVE4 666 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 CELF3Q5SZQ8 465 aaKnown RBP17.24■□□□□ 0.35
SPG11-215ENST00000559193 CES4AQ5XG92 561 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 ALYREFQ86V81 257 aaKnown RBP17.24■□□□□ 0.35
SPG11-215ENST00000559193 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.24■□□□□ 0.35
SPG11-215ENST00000559193 LRRN4Q8WUT4 740 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 OSBPL1AQ9BXW6 950 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 NMUR2Q9GZQ4 415 aa17.24■□□□□ 0.35
SPG11-215ENST00000559193 IQCGQ9H095 443 aaKnown RBP17.24■□□□□ 0.35
SPG11-215ENST00000559193 A6NHS1 94 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 UGT1A9O60656 530 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 KRT37O76014 449 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 NEBLO76041 1014 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 PFKMP08237 780 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 OSBPP22059 807 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 ATICP31939 592 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 CCNFP41002 786 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 CCDC14Q49A88 953 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 FAM91A1Q658Y4 838 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 CAPRIN2Q6IMN6 1127 aaKnown RBP17.23■□□□□ 0.35
SPG11-215ENST00000559193 EFCAB12Q6NXP0 572 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 TEX9Q8N6V9 391 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 UGT1A7Q9HAW7 530 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 UGT1A10Q9HAW8 530 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 UGT1A8Q9HAW9 530 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 ETNK2Q9NVF9 386 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 ARMCX1Q9P291 453 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 PLLPQ9Y342 182 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 HEY1Q9Y5J3 304 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms