RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 HFE2Q6ZVN8 426 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 TMEM150AQ86TG1 271 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 VPS36Q86VN1 386 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 EDEM1Q92611 657 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 MRPS31Q92665 395 aaKnown RBP13.06□□□□□ -0.32
GABPB1-208ENST00000558970 RPGRIP1Q96KN7 1286 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 HSFY1Q96LI6 401 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 SLC4A5Q9BY07 1137 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 SMG9Q9H0W8 520 aaKnown RBP13.06□□□□□ -0.32
GABPB1-208ENST00000558970 CCSER2Q9H7U1 834 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 NHEJ1Q9H9Q4 299 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-208ENST00000558970 NMUR1Q9HB89 426 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 SPTLC3Q9NUV7 552 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 EHD2Q9NZN4 543 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 IMPACTQ9P2X3 320 aa13.06□□□□□ -0.32
GABPB1-208ENST00000558970 BZW2Q9Y6E2 419 aaKnown RBP13.06□□□□□ -0.32
GABPB1-208ENST00000558970 SOWAHDA6NJG2 315 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 YJEFN3A6XGL0 299 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 E7ENQ6 273 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 ZNF197O14709 1029 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 MDM4O15151 490 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 GJB6O95452 261 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 POU2F2P09086 479 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 ABCB4P21439 1286 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 HNRNPH3P31942 346 aaKnown RBP13.05□□□□□ -0.32
GABPB1-208ENST00000558970 CDH5P33151 784 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-208ENST00000558970 ACADSBP45954 432 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 EPHA5P54756 1037 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 DAOAP59103 153 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 RNASE9P60153 205 aaKnown RBP13.05□□□□□ -0.32
GABPB1-208ENST00000558970 YWHAGP61981 247 aaKnown RBP eCLIP13.05□□□□□ -0.32
GABPB1-208ENST00000558970 CENPCQ03188 943 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 TAF5Q15542 800 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 MEA1Q16626 185 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 ARHGAP15Q53QZ3 475 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 FAM102AQ5T9C2 384 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-208ENST00000558970 LEMD2Q8NC56 503 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 MSANTD4Q8NCY6 345 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 SUSD6Q92537 303 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 FGF13Q92913 245 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 CCDC42Q96M95 316 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 CEP295NLQ96MC4 621 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 ZSWIM3Q96MP5 696 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 NECTIN4Q96NY8 510 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 SLC22A12Q96S37 553 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 MYADMQ96S97 322 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 CYP2S1Q96SQ9 504 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 UBXN6Q9BZV1 441 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 NACA2Q9H009 215 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 CNGB3Q9NQW8 809 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
GABPB1-208ENST00000558970 OSER1Q9NX31 292 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 ADAM22Q9P0K1 906 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 SCML2Q9UQR0 700 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 USP3Q9Y6I4 520 aa13.05□□□□□ -0.32
GABPB1-208ENST00000558970 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-208ENST00000558970 ZNF840PA6NDX5 716 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 FGF19O95750 216 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 PTMAP06454 111 aaKnown RBP13.04□□□□□ -0.32
GABPB1-208ENST00000558970 CKMP06732 381 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 MTF1Q14872 753 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 SMAD2Q15796 467 aaKnown RBP13.04□□□□□ -0.32
GABPB1-208ENST00000558970 CCDC122Q5T0U0 273 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 BTBD8Q5XKL5 378 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 SMYD5Q6GMV2 418 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 ACAD10Q6JQN1 1059 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 POTEHQ6S545 545 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 CYP26C1Q6V0L0 522 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 RSRC2Q7L4I2 434 aaKnown RBP13.04□□□□□ -0.32
GABPB1-208ENST00000558970 BHLHA9Q7RTU4 235 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 SCD5Q86SK9 330 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 TMEM110Q86TL2 294 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 XYLT1Q86Y38 959 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 NPAS3Q8IXF0 933 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 ARL14EPQ8N8R7 260 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-208ENST00000558970 PDZD8Q8NEN9 1154 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 STK32AQ8WU08 396 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 GOLGA1Q92805 767 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 C18orf8Q96DM3 657 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 FAM122AQ96E09 287 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 PANX2Q96RD6 677 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 METTL5Q9NRN9 209 aaKnown RBP13.04□□□□□ -0.32
GABPB1-208ENST00000558970 SMPD4Q9NXE4 827 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 IL37Q9NZH6 218 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 MYO1AQ9UBC5 1043 aa13.04□□□□□ -0.32
GABPB1-208ENST00000558970 SYNJ2BP-COX16A0A087WUM0 186 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 C2CD4DB7Z1M9 353 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 SCAMP3O14828 347 aaKnown RBP13.03□□□□□ -0.32
GABPB1-208ENST00000558970 FBXO21O94952 628 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 PAPLNO95428 1278 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 TBX18O95935 607 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 LTFP02788 710 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 FTLP02792 175 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-208ENST00000558970 IRF1P10914 325 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 MBL2P11226 248 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-208ENST00000558970 RARGP13631 454 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 MMP8P22894 467 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 EFEMP1Q12805 493 aa13.03□□□□□ -0.32
GABPB1-208ENST00000558970 C10orf120Q5SQS8 335 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms