RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 IFNAR2P48551 515 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 CCR3P51677 355 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 KIF11P52732 1056 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 YWHAEP62258 255 aaKnown RBP11.86□□□□□ -0.51
BMP4-204ENST00000558961 AMPD2Q01433 879 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 GAB4Q2WGN9 574 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 CCDC40Q4G0X9 1142 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 ZNF394Q53GI3 561 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 HECTD3Q5T447 861 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 FSTL4Q6MZW2 842 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 Q6ZS52 159 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 CCDC186Q7Z3E2 898 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 LUZP1Q86V48 1076 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 ZNF276Q8N554 614 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 TTC8Q8TAM2 541 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 PPP1R9BQ96SB3 815 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 UBXN6Q9BZV1 441 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 NAT10Q9H0A0 1025 aaKnown RBP11.86□□□□□ -0.51
BMP4-204ENST00000558961 TLR8Q9NR97 1041 aaKnown RBP11.86□□□□□ -0.51
BMP4-204ENST00000558961 RBM12Q9NTZ6 932 aaKnown RBP11.86□□□□□ -0.51
BMP4-204ENST00000558961 RWDD2AQ9UIY3 292 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 USP3Q9Y6I4 520 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 E2F8A0AVK6 867 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 SLC9A3R1O14745 358 aaPredicted RBP11.85□□□□□ -0.51
BMP4-204ENST00000558961 TLR5O60602 858 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 ABL1P00519 1130 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 CYP17A1P05093 508 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 MBL2P11226 248 aaPredicted RBP11.85□□□□□ -0.51
BMP4-204ENST00000558961 HOXA6P31267 233 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 EIF2DP41214 584 aaKnown RBP11.85□□□□□ -0.51
BMP4-204ENST00000558961 PGFP49763 221 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 PSEN1P49768 467 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 STX17P56962 302 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 PPP2R5DQ14738 602 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 RAB41Q5JT25 222 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 KLHDC10Q6PID8 442 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 SARM1Q6SZW1 724 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 TTC30AQ86WT1 665 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 ENOX1Q8TC92 643 aaKnown RBP11.85□□□□□ -0.51
BMP4-204ENST00000558961 OTUB2Q96DC9 234 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 LINC00597Q9H2U6 94 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 CCSER2Q9H7U1 834 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 OSER1Q9NX31 292 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 ZSCAN32Q9NX65 697 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 CHORDC1Q9UHD1 332 aaPredicted RBP11.85□□□□□ -0.51
BMP4-204ENST00000558961 R4GN57 208 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 EML5Q05BV3 1969 aa11.85□□□□□ -0.51
BMP4-204ENST00000558961 CHURC1-FNTBB4DL54 471 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 K7ESF4 209 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 CYP26A1O43174 497 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 GREM1O60565 184 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 FGFR1OPO95684 399 aaKnown RBP11.84□□□□□ -0.51
BMP4-204ENST00000558961 PAEPP09466 180 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 ACO1P21399 889 aaKnown RBP11.84□□□□□ -0.51
BMP4-204ENST00000558961 DRD1P21728 446 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 BCAT1P54687 386 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 SATB1Q01826 763 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 GCNT1Q02742 428 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 CSTF1Q05048 431 aaKnown RBP11.84□□□□□ -0.51
BMP4-204ENST00000558961 KCNH2Q12809 1159 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 GRSF1Q12849 480 aaKnown RBP eCLIP11.84□□□□□ -0.51
BMP4-204ENST00000558961 NR1H3Q13133 447 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 FBXO43Q4G163 708 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 PKDCCQ504Y2 493 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 ADGRG2Q8IZP9 1017 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 ANKRD52Q8NB46 1076 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 EZH1Q92800 747 aaPredicted RBP11.84□□□□□ -0.51
BMP4-204ENST00000558961 CD101Q93033 1021 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 EXOC4Q96A65 974 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 HEXIM2Q96MH2 286 aaKnown RBP11.84□□□□□ -0.51
BMP4-204ENST00000558961 NT5C1BQ96P26 610 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 P2RY13Q9BPV8 354 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 SRRTQ9BXP5 876 aaKnown RBP11.84□□□□□ -0.51
BMP4-204ENST00000558961 EPC1Q9H2F5 836 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 NMUR1Q9HB89 426 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 FBRSL1Q9HCM7 1045 aaKnown RBP11.84□□□□□ -0.51
BMP4-204ENST00000558961 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.84□□□□□ -0.51
BMP4-204ENST00000558961 SMPD4Q9NXE4 827 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 CLIC5Q9NZA1 410 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 CFAP97Q9P2B7 532 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 TBC1D14Q9P2M4 693 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 TSPAN16Q9UKR8 245 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 KIAA1257Q9ULG3 409 aa11.84□□□□□ -0.51
BMP4-204ENST00000558961 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.84□□□□□ -0.51
BMP4-204ENST00000558961 MYOFQ9NZM1 2061 aa11.83□□□□□ -0.51
BMP4-204ENST00000558961 O00370 1275 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 XPO1O14980 1071 aaKnown RBP11.83□□□□□ -0.52
BMP4-204ENST00000558961 EGFP01133 1207 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 LMNAP02545 664 aaKnown RBP11.83□□□□□ -0.52
BMP4-204ENST00000558961 AFPP02771 609 aaKnown RBP11.83□□□□□ -0.52
BMP4-204ENST00000558961 ZNF18P17022 549 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 OPRD1P41143 372 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 PLA2G4AP47712 749 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 CXCL12P48061 93 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 GALK1P51570 392 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 ZNF132P52740 706 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 NRLP54845 237 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 CETN1Q12798 172 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 SGO2Q562F6 1265 aa11.83□□□□□ -0.52
BMP4-204ENST00000558961 NAIF1Q69YI7 327 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms