RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 PPANQ9NQ55 473 aaKnown RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 A0A1W2PQ45 241 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 A0A1W2PQY0 241 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 GOLGA8KD6RF30 607 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 RGS16O15492 202 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 TRUB2O95900 331 aaKnown RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 CKBP12277 381 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 KCNE1P15382 129 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 MAN1A1P33908 653 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 GRIK1P39086 918 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 CDKN2BP42772 138 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 GATMP50440 423 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 APLP1P51693 650 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 CCNG2Q16589 344 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 BBS9Q3SYG4 887 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 PYROXD2Q8N2H3 581 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 EPS8L3Q8TE67 593 aaKnown RBP11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 TBCBQ99426 244 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 HOMER3Q9NSC5 361 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 GRHL1Q9NZI5 618 aa11.29□□□□□ -0.6
CSPG4P5-201ENST00000558731 A0A087WUV0 522 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 C2CD4BA6NLJ0 364 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 KCNN4O15554 427 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 TADA2AO75478 443 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 ZBED1O96006 694 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 MOCS2O96007 188 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 NPR3P17342 541 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 CDH5P33151 784 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 HSPA9P38646 679 aaKnown RBP11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 GUCY1A3Q02108 690 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 TCEAL1Q15170 157 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 FBXW10Q5XX13 1052 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 OVOS1Q6IE37 1185 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 ZDHHC24Q6UX98 284 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 ALKAL1Q6UXT8 129 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 DBF4BQ8NFT6 615 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 RUBCNQ92622 972 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 MCRS1Q96EZ8 462 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 UNC93B1Q9H1C4 597 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 KCNK9Q9NPC2 374 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 FOXO6A8MYZ6 492 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 C2CD2LO14523 706 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 LIASO43766 372 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 ODC1P11926 461 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 NR1D1P20393 614 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 GDF10P55107 478 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 HFE2Q6ZVN8 426 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 ZNF280BQ86YH2 543 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 ZBED8Q8IZ13 594 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 SLC35F5Q8WV83 523 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 RUNDC3BQ96NL0 473 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 PPP1R10Q96QC0 940 aaKnown RBP11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 PAIP2Q9BPZ3 127 aaKnown RBP11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 YY1AP1Q9H869 796 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 LRRC4CQ9HCJ2 640 aa11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 LAMA2P24043 3122 aaKnown RBP11.28□□□□□ -0.6
CSPG4P5-201ENST00000558731 ARL4AP40617 200 aa11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 TSPY1Q01534 308 aa11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 SLC25A11Q02978 314 aaKnown RBP11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 OLFML1Q6UWY5 402 aa11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 HOOK3Q86VS8 718 aa11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 MYLPFQ96A32 169 aa11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 RBM15Q96T37 977 aaKnown RBP eCLIP11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 CDC42EP4Q9H3Q1 356 aaKnown RBP11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 DDIT4Q9NX09 232 aa11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 HCSTQ9UBK5 93 aa11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 AP4E1Q9UPM8 1137 aa11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 NAALADL1Q9UQQ1 740 aa11.27□□□□□ -0.6
CSPG4P5-201ENST00000558731 E7EVH7 732 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 IFNAR2P48551 515 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 MCCD1P59942 119 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 DEUP1Q05D60 604 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 ZNF844Q08AG5 666 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 PPP1R15BQ5SWA1 713 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 ANKRD42Q8N9B4 389 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 GSTCDQ8NEC7 633 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 DYDC1Q8WWB3 177 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 CRTAC1Q9NQ79 661 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 GIT1Q9Y2X7 761 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 DCDC2CA8MYV0 355 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 AMPD1P23109 780 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 TNFRSF8P28908 595 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 PCSK1P29120 753 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 ROR1Q01973 937 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 LMNB2Q03252 620 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 FAM35AQ86V20 835 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 THEM5Q8N1Q8 247 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 CCDC185Q8N715 623 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 URGCPQ8TCY9 931 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 CAPS2Q9BXY5 557 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 UBXN6Q9BZV1 441 aa11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 PRDM5Q9NQX1 630 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 PIH1D1Q9NWS0 290 aaKnown RBP11.27□□□□□ -0.61
CSPG4P5-201ENST00000558731 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms