RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ZMIZ2Q8NF64 920 aa16.44■□□□□ 0.22
TPM1-211ENST00000558314 TAS1R2Q8TE23 839 aa16.44■□□□□ 0.22
TPM1-211ENST00000558314 TAF4BQ92750 862 aa16.44■□□□□ 0.22
TPM1-211ENST00000558314 WBP2Q969T9 261 aa16.44■□□□□ 0.22
TPM1-211ENST00000558314 EEF2KMTQ96G04 330 aa16.44■□□□□ 0.22
TPM1-211ENST00000558314 CNTNAP3BQ96NU0 1288 aa16.44■□□□□ 0.22
TPM1-211ENST00000558314 CNTNAP3Q9BZ76 1288 aa16.44■□□□□ 0.22
TPM1-211ENST00000558314 MMP17Q9ULZ9 603 aa16.44■□□□□ 0.22
TPM1-211ENST00000558314 E2F8A0AVK6 867 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 TBC1D3BA6NDS4 549 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 FOXD2O60548 495 aaPredicted RBP16.43■□□□□ 0.22
TPM1-211ENST00000558314 TLR5O60602 858 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 TBX18O95935 607 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 ASS1P00966 412 aaKnown RBP16.43■□□□□ 0.22
TPM1-211ENST00000558314 MYL1P05976 194 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 ZNF806P0C7X5 589 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 PGFP49763 221 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 GAD2Q05329 585 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 ZNF394Q53GI3 561 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 C1orf220Q5T0J3 134 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 KRBA2Q6ZNG9 492 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 GPRIN1Q7Z2K8 1008 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 UNC93AQ86WB7 457 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 CCDC150Q8NCX0 1101 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 HMGB4Q8WW32 186 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 RLN3Q8WXF3 142 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 TWNKQ96RR1 684 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 GOLPH3LQ9H4A5 285 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 FBXO44Q9H4M3 255 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 TLR8Q9NR97 1041 aaKnown RBP16.43■□□□□ 0.22
TPM1-211ENST00000558314 NUDT5Q9UKK9 219 aa16.43■□□□□ 0.22
TPM1-211ENST00000558314 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.42■□□□□ 0.22
TPM1-211ENST00000558314 SGK1O00141 431 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 IKBKBO14920 756 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 MDM4O15151 490 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 CYP26A1O43174 497 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 MAP3K13O43283 966 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 ALDH1A2O94788 518 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 RHOBTB3O94955 611 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 CAVIN2O95810 425 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 ACO1P21399 889 aaKnown RBP16.42■□□□□ 0.22
TPM1-211ENST00000558314 GRIA2P42262 883 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 WASP42768 502 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 DHPSP49366 369 aaPredicted RBP16.42■□□□□ 0.22
TPM1-211ENST00000558314 MRPS21P82921 87 aaKnown RBP16.42■□□□□ 0.22
TPM1-211ENST00000558314 PPP3CAQ08209 521 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 DPYDQ12882 1025 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 ADAM9Q13443 819 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 CRY1Q16526 586 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 STPG1Q5TH74 334 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 TPGS1Q6ZTW0 290 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 INTS8Q75QN2 995 aaKnown RBP16.42■□□□□ 0.22
TPM1-211ENST00000558314 ARMCX6Q7L4S7 300 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 TMEM25Q86YD3 366 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 SMYD4Q8IYR2 804 aaPredicted RBP16.42■□□□□ 0.22
TPM1-211ENST00000558314 MDGA1Q8NFP4 955 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 BHMTQ93088 406 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 CYFIP2Q96F07 1278 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 ZC3H10Q96K80 434 aaKnown RBP16.42■□□□□ 0.22
TPM1-211ENST00000558314 ZFRQ96KR1 1074 aaKnown RBP16.42■□□□□ 0.22
TPM1-211ENST00000558314 NT5C1AQ9BXI3 368 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 APOBEC3GQ9HC16 384 aaKnown RBP16.42■□□□□ 0.22
TPM1-211ENST00000558314 VPS45Q9NRW7 570 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 EBF1Q9UH73 591 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 TRAF3IP3Q9Y228 551 aa16.42■□□□□ 0.22
TPM1-211ENST00000558314 SPAG17Q6Q759 2223 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 NEDD8-MDP1E9PL57 170 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 HNRNPLP14866 589 aaKnown RBP eCLIP16.41■□□□□ 0.224e-7■■□□□ 13.3
TPM1-211ENST00000558314 BCKDHBP21953 392 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 RPL13P26373 211 aaKnown RBP16.41■□□□□ 0.22
TPM1-211ENST00000558314 PSMC2P35998 433 aaKnown RBP16.41■□□□□ 0.22
TPM1-211ENST00000558314 C10orf76Q5T2E6 689 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 TMEM92Q6UXU6 159 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 CRYBG2Q8N1P7 616 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 IL17RCQ8NAC3 791 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 NIF3L1Q9GZT8 377 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 SCAND2PQ9GZW5 306 aaPredicted RBP16.41■□□□□ 0.22
TPM1-211ENST00000558314 POLMQ9NP87 494 aaPredicted RBP16.41■□□□□ 0.22
TPM1-211ENST00000558314 SPHK2Q9NRA0 654 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 COMMD8Q9NX08 183 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 DEC1Q9P2X7 70 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 PCDHGA5Q9Y5G8 931 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
TPM1-211ENST00000558314 A0A1W2PQH9 124 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 TCRBV21S2A2A0A5A6 115 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 TRIM24O15164 1050 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 TULP3O75386 442 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 ZNF202O95125 648 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 ATP5C1P36542 298 aaKnown RBP16.4■□□□□ 0.22
TPM1-211ENST00000558314 TUBP50607 506 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 GOLGA8FQ08AF8 430 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 GOLGA8DPQ0D2H9 430 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 EOGTQ5NDL2 527 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 C10orf120Q5SQS8 335 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 CLEC20AQ6ZU45 233 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 CYP2U1Q7Z449 544 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 PIGKQ92643 395 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 OTUB2Q96DC9 234 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 CNOT6LQ96LI5 555 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms