RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PROCP04070 461 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 FDPSP14324 419 aaKnown RBP12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 TKTP29401 623 aaKnown RBP12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 QARSP47897 775 aaKnown RBP12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 SLC1A6P48664 564 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 NAA20P61599 178 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 TTC23LQ6PF05 361 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 LINC00523Q86TU6 105 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 ATG16L2Q8NAA4 619 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZBTB8BQ8NAP8 495 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 SH3TC2Q8TF17 1288 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZFAND2BQ8WV99 257 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZNF333Q96JL9 665 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 ENTPD7Q9NQZ7 604 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 SLC5A4Q9NY91 659 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 TMCC3Q9ULS5 477 aa12.14□□□□□ -0.47
CSPG4P12-201ENST00000558282 TRIM43BA6NCK2 446 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 PCP4L1A6NKN8 68 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 CD3EAPO15446 510 aaKnown RBP12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 ARIH2O95376 493 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 PDGFRAP16234 1089 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 TSNQ15631 228 aaKnown RBP12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 RIPOR1Q6ZS17 1223 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 CCDC36Q8IYA8 594 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZNF669Q96BR6 464 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 MCEEQ96PE7 176 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 SLC25A23Q9BV35 468 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 C2orf40Q9H1Z8 148 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 RAPGEFL1Q9UHV5 662 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 RAD54BQ9Y620 910 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 TBX3O15119 743 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 IFNA14P01570 189 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 LYNP07948 512 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 USP17L8P0C7I0 530 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 AKAP5P24588 427 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 MAGEA8P43361 318 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 SCRN3Q0VDG4 424 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 EPHA7Q15375 998 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 AGKQ53H12 422 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 RNF19BQ6ZMZ0 732 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZDHHC13Q8IUH4 622 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 FAM71DQ8N9W8 422 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 EXD1Q8NHP7 514 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 USP13Q92995 863 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 AVENQ9NQS1 362 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 RBAKQ9NYW8 714 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 DLC1Q96QB1 1528 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 KAT6BQ8WYB5 2073 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 C2CD2LO14523 706 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 PTGS2P35354 604 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 KYAT1Q16773 422 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 C5orf22Q49AR2 442 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 SH3BP5LQ7L8J4 393 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 PIGUQ9H490 435 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 PCDH9Q9HC56 1237 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 VPS45Q9NRW7 570 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 MRPL39Q9NYK5 338 aaKnown RBP12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 TRIM17Q9Y577 477 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 AP4B1Q9Y6B7 739 aa12.13□□□□□ -0.47
CSPG4P12-201ENST00000558282 SDR42E2A6NKP2 422 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 CCNKO75909 580 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 ATG7O95352 703 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 S100A6P06703 90 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 RBP1P09455 135 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 HIST1H2AGP0C0S8 130 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 NPR3P17342 541 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 HIST1H2ADP20671 130 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 WARSP23381 471 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 ACAT1P24752 427 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 HK2P52789 917 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 ATP6AP1LQ52LC2 224 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 BOLA3Q53S33 107 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 C2CD6Q53TS8 623 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 SDE2Q6IQ49 451 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 USP49Q70CQ1 688 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 UBE2Q1Q7Z7E8 422 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 WDR36Q8NI36 951 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 PSMA8Q8TAA3 256 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 HIST1H2AHQ96KK5 128 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 HIST1H2AJQ99878 128 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 H2AFJQ9BTM1 129 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 OSBPL10Q9BXB5 764 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 SP110Q9HB58 689 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 NDFIP2Q9NV92 336 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 CHKBQ9Y259 395 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 E9PCH4 1651 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 SUPT3HB4E1H0 165 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 F5H423 210 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 DDX3XO00571 662 aaKnown RBP eCLIP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 GUCY1A2P33402 732 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 GP5P40197 560 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 OSTNP61366 133 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 LRRC74AQ0VAA2 488 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 MEA1Q16626 185 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 PDK4Q16654 411 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 KHDRBS2Q5VWX1 349 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 TTI2Q6NXR4 508 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 KYAT3Q6YP21 454 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 C16orf62Q7Z3J2 963 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms