RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 HLA-CQ95604 372 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 MAML3Q96JK9 1138 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 TNIP3Q96KP6 325 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 SNX27Q96L92 541 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 C9orf72Q96LT7 481 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 RNF157Q96PX1 679 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 CYTH2Q99418 400 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 ELAC2Q9BQ52 826 aaKnown RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 ZNF670Q9BS34 389 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 TINF2Q9BSI4 451 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 TMEM121Q9BTD3 319 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 DHRS4Q9BTZ2 278 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 KATNAL1Q9BW62 490 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 FHDC1Q9C0D6 1143 aaPredicted RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 ADAMTS10Q9H324 1103 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 TRABDQ9H4I3 376 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 RABEP2Q9H5N1 569 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 ACSS3Q9H6R3 686 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 VPS37BQ9H9H4 285 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 LRRC4CQ9HCJ2 640 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 PNPLA8Q9NP80 782 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 GDAP2Q9NXN4 497 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 CNTN3Q9P232 1028 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 KLHL14Q9P2G3 628 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 GTF2IRD1Q9UHL9 959 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 CYTH4Q9UIA0 394 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 STARD13Q9Y3M8 1113 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 CLUHO75153 1309 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 CCL15-CCL14A0A0B4J2E2 113 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 IQANK1A0A1B0GTG1 560 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 MOXD2PA6NHM9 499 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 HACD1B0YJ81 288 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 TCP11X1B4DZS4 312 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 BTBD19C9JJ37 291 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 APOL1O14791 398 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 PPP1R12AO14974 1030 aaPredicted RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 SBF1O95248 1867 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 F2P00734 622 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 IFNB1P01574 187 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 VTNP04004 478 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 GJB1P08034 283 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 RBP3P10745 1247 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 DARSP14868 501 aaKnown RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 KRT15P19012 456 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 IL1R2P27930 398 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 RPL22P35268 128 aaKnown RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 RAP1GAPP47736 663 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 SCTRP47872 440 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 BCAT1P54687 386 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 AIF1P55008 147 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 CDH6P55285 790 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 SARNPP82979 210 aaKnown RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 CDK16Q00536 496 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 LLGL1Q15334 1064 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 MTFR1Q15390 333 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 SEPT7Q16181 437 aaKnown RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 CCL15Q16663 113 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 GOLGA7BQ2TAP0 167 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 SV2CQ496J9 727 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 XKR4Q5GH76 650 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 EFHC1Q5JVL4 640 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 MARCH8Q5T0T0 291 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 DAB2IPQ5VWQ8 1189 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 SLC9A4Q6AI14 798 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 CYP4F22Q6NT55 531 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 DARS2Q6PI48 645 aaKnown RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 CYS1Q717R9 158 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 CATSPER4Q7RTX7 472 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 SPATA21Q7Z572 469 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 GPR142Q7Z601 462 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 SRRM1Q8IYB3 904 aaKnown RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 HACE1Q8IYU2 909 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 ANKRD52Q8NB46 1076 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 DENND1AQ8TEH3 1009 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 CPT1BQ92523 772 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 FAF2Q96CS3 445 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 TGS1Q96RS0 853 aaKnown RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 TUBB6Q9BUF5 446 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 CALN1Q9BXU9 219 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 PITPNM3Q9BZ71 974 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 OSBPL7Q9BZF2 842 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 KLC2Q9H0B6 622 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 ZNFX1Q9P2E3 1918 aaKnown RBP8.67□□□□□ -1.02
SPG11-209ENST00000558253 TSPAN16Q9UKR8 245 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 IKBKGQ9Y6K9 419 aa8.67□□□□□ -1.02
SPG11-209ENST00000558253 PIRO00625 290 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 HNRNPCL1O60812 293 aaKnown RBP8.66□□□□□ -1.02
SPG11-209ENST00000558253 GPR32O75388 356 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 RASSF9O75901 435 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 ASMTLO95671 621 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 PFKMP08237 780 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 ZSCAN5DPP0CG00 497 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 TCF4P15884 667 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 SMPD1P17405 629 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 HOXA11P31270 313 aaPredicted RBP8.66□□□□□ -1.02
SPG11-209ENST00000558253 ADCYAP1R1P41586 468 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 MSH2P43246 934 aa8.66□□□□□ -1.02
SPG11-209ENST00000558253 IFNAR2P48551 515 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms