RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CYLDQ9NQC7 956 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 OSER1Q9NX31 292 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 CAPN11Q9UMQ6 739 aa26.85■■□□□ 1.89
SMAD6-202ENST00000557916 DPYSL4O14531 572 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 CHRNB2P17787 502 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 TUBP50607 506 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 TMEM110Q86TL2 294 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 ARHGAP18Q8N392 663 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 SLC44A3Q8N4M1 653 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 USP13Q92995 863 aaPredicted RBP26.84■■□□□ 1.89
SMAD6-202ENST00000557916 PPP1R13BQ96KQ4 1090 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 PLA2G2FQ9BZM2 168 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 MIS12Q9H081 205 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 RNF38Q9H0F5 515 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 TDP1Q9NUW8 608 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 AIPL1Q9NZN9 384 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 MUTYHQ9UIF7 546 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 BDP1A6H8Y1 2624 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 NCOR1O75376 2440 aa26.84■■□□□ 1.89
SMAD6-202ENST00000557916 ANAPC1Q9H1A4 1944 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 FBXO21O94952 628 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 LSM8O95777 96 aaKnown RBP26.83■■□□□ 1.89
SMAD6-202ENST00000557916 GYPCP04921 128 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 CDH5P33151 784 aaPredicted RBP26.83■■□□□ 1.89
SMAD6-202ENST00000557916 DAOAP59103 153 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 YWHAGP61981 247 aaKnown RBP eCLIP26.83■■□□□ 1.89
SMAD6-202ENST00000557916 FMO1Q01740 532 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 TDGQ13569 410 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 ASIC2Q16515 512 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 SCUBE3Q8IX30 993 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 RSPRY1Q96DX4 576 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 CPXM1Q96SM3 734 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.83■■□□□ 1.89
SMAD6-202ENST00000557916 CLIC5Q9NZA1 410 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 SORCS3Q9UPU3 1222 aa26.83■■□□□ 1.89
SMAD6-202ENST00000557916 LUC7L2Q9Y383 392 aaKnown RBP26.83■■□□□ 1.89
SMAD6-202ENST00000557916 MYO16Q9Y6X6 1858 aa26.83■■□□□ 1.88
SMAD6-202ENST00000557916 HEPACAM2A8MVW5 462 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 E5RJQ4 531 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 COCHO43405 550 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 TLR5O60602 858 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 OLFM2O95897 454 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 RARGP13631 454 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 ZBED6P86452 979 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 BHLHA9Q7RTU4 235 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 CELF5Q8N6W0 485 aaKnown RBP26.82■■□□□ 1.88
SMAD6-202ENST00000557916 CLEC4CQ8WTT0 213 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 IRGQQ8WZA9 623 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 AGPAT1Q99943 283 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 NUCKS1Q9H1E3 243 aaKnown RBP26.82■■□□□ 1.88
SMAD6-202ENST00000557916 CCL26Q9Y258 94 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 YJEFN3A6XGL0 299 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 E7ENQ6 273 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 RALAP11233 206 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 CASP14P31944 242 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 ZNF268Q14587 947 aaPredicted RBP26.82■■□□□ 1.88
SMAD6-202ENST00000557916 E4F1Q66K89 784 aaPredicted RBP26.82■■□□□ 1.88
SMAD6-202ENST00000557916 VITQ6UXI7 678 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 NACA2Q9H009 215 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 KIF9Q9HAQ2 790 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 OBP2AQ9NY56 170 aa26.82■■□□□ 1.88
SMAD6-202ENST00000557916 MYO10Q9HD67 2058 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 MBL2P11226 248 aaPredicted RBP26.81■■□□□ 1.88
SMAD6-202ENST00000557916 SNX16P57768 344 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 SLC7A9P82251 487 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 TRIM14Q14142 442 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 BTBD8Q5XKL5 378 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 TRIM72Q6ZMU5 477 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 MFSD6LQ8IWD5 586 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 IPO4Q8TEX9 1081 aaKnown RBP26.81■■□□□ 1.88
SMAD6-202ENST00000557916 SYNCQ9H7C4 482 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 TJP2Q9UDY2 1190 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 ARHGAP26Q9UNA1 814 aa26.81■■□□□ 1.88
SMAD6-202ENST00000557916 PAPSS1O43252 624 aaPredicted RBP26.8■■□□□ 1.88
SMAD6-202ENST00000557916 TBX18O95935 607 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 CYP1A1P04798 512 aaPredicted RBP26.8■■□□□ 1.88
SMAD6-202ENST00000557916 PSMC3P17980 439 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 ATP5C1P36542 298 aaKnown RBP26.8■■□□□ 1.88
SMAD6-202ENST00000557916 NOMO3P69849 1222 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 PTPN20Q4JDL3 420 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 BSPRYQ5W0U4 402 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 TADA2BQ86TJ2 420 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 ZNF276Q8N554 614 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 DEPDC1BQ8WUY9 529 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 CPA5Q8WXQ8 436 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 LRRC3BQ96PB8 259 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 CDK5RAP1Q96SZ6 601 aaKnown RBP26.8■■□□□ 1.88
SMAD6-202ENST00000557916 PCDHB18PQ96TA0 734 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 SEPT11Q9NVA2 429 aaKnown RBP26.8■■□□□ 1.88
SMAD6-202ENST00000557916 NUDT5Q9UKK9 219 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 CPQQ9Y646 472 aa26.8■■□□□ 1.88
SMAD6-202ENST00000557916 NUP210Q8TEM1 1887 aaPredicted RBP26.79■■□□□ 1.88
SMAD6-202ENST00000557916 FAM170AA1A519 330 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 SART1O43290 800 aaKnown RBP26.79■■□□□ 1.88
SMAD6-202ENST00000557916 PRKCIP41743 596 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 ZNF75DP51815 510 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 GRM2Q14416 872 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 C10orf120Q5SQS8 335 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 NAA35Q5VZE5 725 aa26.79■■□□□ 1.88
SMAD6-202ENST00000557916 HFE2Q6ZVN8 426 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms