RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ZFRQ96KR1 1074 aaKnown RBP15.48■□□□□ 0.07
SHMT2-235ENST00000557740 NT5C1AQ9BXI3 368 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 CYP3A43Q9HB55 503 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 CSNK1G1Q9HCP0 422 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 TLR8Q9NR97 1041 aaKnown RBP15.48■□□□□ 0.07
SHMT2-235ENST00000557740 MMP17Q9ULZ9 603 aa15.48■□□□□ 0.07
SHMT2-235ENST00000557740 GDF9O60383 454 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 TLR5O60602 858 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 BEST1O76090 585 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 RHOBTB1O94844 696 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 ZNF202O95125 648 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 ZDHHC11BP0C7U3 371 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 ZNF806P0C7X5 589 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 CD58P19256 250 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 GBP1P32455 592 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 MPLP40238 635 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 GRIA2P42262 883 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 SLC6A11P48066 632 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 MRPS21P82921 87 aaKnown RBP15.47■□□□□ 0.07
SHMT2-235ENST00000557740 GAD2Q05329 585 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 ENPEPQ07075 957 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 PPP3CAQ08209 521 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 INCA1Q0VD86 236 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 ADAM9Q13443 819 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 USP39Q53GS9 565 aaKnown RBP15.47■□□□□ 0.07
SHMT2-235ENST00000557740 IL31Q6EBC2 164 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 ANO7Q6IWH7 933 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 C11orf74Q86VG3 221 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 C12orf40Q86WS4 652 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 TTC30AQ86WT1 665 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 C12orf29Q8N999 325 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 TAS1R2Q8TE23 839 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 TPSD1Q9BZJ3 242 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 ARHGEF4Q9NR80 690 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 ATG2BQ96BY7 2078 aa15.47■□□□□ 0.07
SHMT2-235ENST00000557740 DNAH14Q0VDD8 3507 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 DCLK1O15075 740 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 ALDH1A2O94788 518 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 KLF8O95600 359 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-235ENST00000557740 KCNA4P22459 653 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 TIE1P35590 1138 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 GOLGA8FQ08AF8 430 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 GOLGA8DPQ0D2H9 430 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 HSF5Q4G112 596 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-235ENST00000557740 PREPLQ4J6C6 727 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-235ENST00000557740 CLEC20AQ6ZU45 233 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 BBS7Q8IWZ6 715 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 ALLCQ8N6M5 410 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 CNOT6LQ96LI5 555 aaKnown RBP15.46■□□□□ 0.07
SHMT2-235ENST00000557740 TWNKQ96RR1 684 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 HNRNPABQ99729 332 aaKnown RBP15.46■□□□□ 0.07
SHMT2-235ENST00000557740 DUSP15Q9H1R2 295 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-235ENST00000557740 APOBEC3GQ9HC16 384 aaKnown RBP15.46■□□□□ 0.07
SHMT2-235ENST00000557740 GDPD2Q9HCC8 539 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 TMEM8AQ9HCN3 771 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 VPS45Q9NRW7 570 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 PCDHA5Q9Y5H7 936 aa15.46■□□□□ 0.07
SHMT2-235ENST00000557740 SPAG17Q6Q759 2223 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 CYP26A1O43174 497 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 HOXC11O43248 304 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-235ENST00000557740 STX10O60499 249 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 CILPO75339 1184 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 EPB41P11171 864 aaKnown RBP15.45■□□□□ 0.06
SHMT2-235ENST00000557740 ACO1P21399 889 aaKnown RBP15.45■□□□□ 0.06
SHMT2-235ENST00000557740 GTF2H1P32780 548 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 MXI1P50539 228 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 CREB5Q02930 508 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 MESP2Q0VG99 397 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 CRY1Q16526 586 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 ANO4Q32M45 955 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 EDRF1Q3B7T1 1238 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 ZCWPW2Q504Y3 356 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 PPM1JQ5JR12 505 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 EOGTQ5NDL2 527 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 KRT39Q6A163 491 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 GPRIN1Q7Z2K8 1008 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 RASSF3Q86WH2 238 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 SFTPA1Q8IWL2 248 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 IL17RCQ8NAC3 791 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 TXNDC5Q8NBS9 432 aaKnown RBP15.45■□□□□ 0.06
SHMT2-235ENST00000557740 DDX1Q92499 740 aaKnown RBP15.45■□□□□ 0.06
SHMT2-235ENST00000557740 CYFIP2Q96F07 1278 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 DUSP9Q99956 384 aaKnown RBP15.45■□□□□ 0.06
SHMT2-235ENST00000557740 SMOC1Q9H4F8 434 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 PNPLA8Q9NP80 782 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 POLMQ9NP87 494 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-235ENST00000557740 SPHK2Q9NRA0 654 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 LSM7Q9UK45 103 aaKnown RBP15.45■□□□□ 0.06
SHMT2-235ENST00000557740 CIZ1Q9ULV3 898 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-235ENST00000557740 SCML2Q9UQR0 700 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 INVSQ9Y283 1065 aa15.45■□□□□ 0.06
SHMT2-235ENST00000557740 TBC1D3BA6NDS4 549 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 ATP5C1P36542 298 aaKnown RBP15.44■□□□□ 0.06
SHMT2-235ENST00000557740 TNFRSF4P43489 277 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 LIMK1P53667 647 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 PLA2G2CQ5R387 149 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 NUDT18Q6ZVK8 323 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 SMYD4Q8IYR2 804 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-235ENST00000557740 NAT16Q8N8M0 369 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 MDGA1Q8NFP4 955 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms