RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 FTSJ1Q9UET6 329 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 SLCO1B1Q9Y6L6 691 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 CABIN1Q9Y6J0 2220 aa11.08□□□□□ -0.64
TRAV33-201ENST00000557514 SPTAN1Q13813 2472 aaKnown RBP11.08□□□□□ -0.64
TRAV33-201ENST00000557514 BSNQ9UPA5 3926 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 COL5A1P20908 1838 aaPredicted RBP11.07□□□□□ -0.64
TRAV33-201ENST00000557514 PP2D1A8MPX8 630 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 PRRT4C9JH25 899 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 GFRA2O00451 464 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 GABRDO14764 452 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 PAPSS1O43252 624 aaPredicted RBP11.07□□□□□ -0.64
TRAV33-201ENST00000557514 IGLV3-19P01714 112 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 JUPP14923 745 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 SCP2P22307 547 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 PCSK1P29120 753 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 ACOT2P49753 483 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 AFF3P51826 1226 aaKnown RBP11.07□□□□□ -0.64
TRAV33-201ENST00000557514 NOP14P78316 857 aaKnown RBP11.07□□□□□ -0.64
TRAV33-201ENST00000557514 POU5F1Q01860 360 aaKnown RBP11.07□□□□□ -0.64
TRAV33-201ENST00000557514 INAVAQ3KP66 663 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 FUT11Q495W5 492 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 SDE2Q6IQ49 451 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 C4orf50Q6ZRC1 276 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 FGF11Q92914 225 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 IGSF8Q969P0 613 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 MYLPFQ96A32 169 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 TMEM176AQ96HP8 235 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 MKRN2Q9H000 416 aaKnown RBP11.07□□□□□ -0.64
TRAV33-201ENST00000557514 SPHK2Q9NRA0 654 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 EHD2Q9NZN4 543 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 KCND2Q9NZV8 630 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 LARSQ9P2J5 1176 aaKnown RBP11.07□□□□□ -0.64
TRAV33-201ENST00000557514 EIF2B4Q9UI10 523 aaKnown RBP11.07□□□□□ -0.64
TRAV33-201ENST00000557514 PCDHB6Q9Y5E3 794 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 SNX11Q9Y5W9 270 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 AK5Q9Y6K8 562 aa11.07□□□□□ -0.64
TRAV33-201ENST00000557514 ANK1P16157 1881 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 KCNJ18B7U540 433 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 TRIM66O15016 1216 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 EPB41L2O43491 1005 aaKnown RBP11.06□□□□□ -0.64
TRAV33-201ENST00000557514 CACNG3O60359 315 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 BRINP1O60477 761 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 HUS1O60921 280 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 MBL2P11226 248 aaPredicted RBP11.06□□□□□ -0.64
TRAV33-201ENST00000557514 POLR2BP30876 1174 aaKnown RBP11.06□□□□□ -0.64
TRAV33-201ENST00000557514 GRIK1P39086 918 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 CSNK1EP49674 416 aaKnown RBP11.06□□□□□ -0.64
TRAV33-201ENST00000557514 CSRP3P50461 194 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 TPMTP51580 245 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 FOSBP53539 338 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 TARDBPQ13148 414 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRAV33-201ENST00000557514 TRIM29Q14134 588 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 SF3A1Q15459 793 aaKnown RBP11.06□□□□□ -0.64
TRAV33-201ENST00000557514 TTC38Q5R3I4 469 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 KRT79Q5XKE5 535 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 TMEM25Q86YD3 366 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 NT5DC4Q86YG4 428 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 ADGRF2Q8IZF7 708 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 LRRC52Q8N7C0 313 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 NSUN7Q8NE18 718 aaKnown RBP11.06□□□□□ -0.64
TRAV33-201ENST00000557514 CXorf38Q8TB03 319 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 MMTAG2Q9BU76 263 aaKnown RBP11.06□□□□□ -0.64
TRAV33-201ENST00000557514 RAB34Q9BZG1 259 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 PCED1AQ9H1Q7 454 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 ITM2CQ9NQX7 267 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 DNAJC17Q9NVM6 304 aaKnown RBP11.06□□□□□ -0.64
TRAV33-201ENST00000557514 GDAP2Q9NXN4 497 aa11.06□□□□□ -0.64
TRAV33-201ENST00000557514 FLNCQ14315 2725 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 K7ENM7 598 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 SLC28A2O43868 658 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 JAK2O60674 1132 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 RFPL3O75679 317 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 NTRK1P04629 796 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 CDK4P11802 303 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 BDNFP23560 247 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 OXTRP30559 389 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 SCN1AP35498 2009 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 GRIA4P48058 902 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 TRAPPC10P48553 1259 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 LHX1P48742 406 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 ACADVLP49748 655 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 SLC12A3P55017 1021 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 PSMC1P62191 440 aaKnown RBP11.05□□□□□ -0.64
TRAV33-201ENST00000557514 CCDC173Q0VFZ6 552 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 KCNH2Q12809 1159 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 TAF10Q12962 218 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 STARD3Q14849 445 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 ANO4Q32M45 955 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 TBC1D25Q3MII6 688 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 HES3Q5TGS1 186 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 FBXL19Q6PCT2 694 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 TOP6BLQ8N6T0 577 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 C1orf127Q8N9H9 656 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 SYT2Q8N9I0 419 aaPredicted RBP11.05□□□□□ -0.64
TRAV33-201ENST00000557514 TTC9Q92623 222 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 GTF3C6Q969F1 213 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 SYT15Q9BQS2 421 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 OSGEPQ9NPF4 335 aa11.05□□□□□ -0.64
TRAV33-201ENST00000557514 CRTAC1Q9NQ79 661 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms