RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 FAM172AQ8WUF8 416 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 C11orf84Q9BUA3 381 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 PLVAPQ9BX97 442 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 POPDC2Q9HBU9 364 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 FNIP2Q9P278 1114 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 AFF4Q9UHB7 1163 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 TTC7AQ9ULT0 858 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 SLC27A5Q9Y2P5 690 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 GBF1Q92538 1859 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 LILRB3O75022 631 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 ABLIM3O94929 683 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 KRT7P08729 469 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 PYGMP11217 842 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 MIPP30301 263 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 NOS2P35228 1153 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 SULT1E1P49888 294 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 TERF1P54274 439 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 RPL10AP62906 217 aaKnown RBP15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 ATP11AP98196 1134 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 RAB33AQ14088 237 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 SHHQ15465 462 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 TPGS2Q68CL5 300 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 SCAMP5Q8TAC9 235 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 AUTS2Q8WXX7 1259 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 CENPIQ92674 756 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 RPGRIP1Q96KN7 1286 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 SPATA17Q96L03 361 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 TRIM62Q9BVG3 475 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 RXFP1Q9HBX9 757 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 NGRNQ9NPE2 291 aaKnown RBP15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 COMMD8Q9NX08 183 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 DDX56Q9NY93 547 aaKnown RBP15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 HSFX1Q9UBD0 423 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 STAP1Q9ULZ2 295 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 USP18Q9UMW8 372 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 SCML2Q9UQR0 700 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 LZTS1Q9Y250 596 aa15.14■□□□□ 0.01
ARHGEF40-208ENST00000557498 CAPN9O14815 690 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 SOAT2O75908 522 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 RTN3O95197 1032 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 TRUB2O95900 331 aaKnown RBP15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 KRT1P04264 644 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 FYNP06241 537 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 TFE3P19532 575 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 IL1R2P27930 398 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 TUFMP49411 452 aaKnown RBP15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 HDAC4P56524 1084 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 IFRD2Q12894 506 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 CLUL1Q15846 466 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 SLC25A52Q3SY17 297 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 DCAF6Q58WW2 860 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 SH3PXD2AQ5TCZ1 1133 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 OTUD1Q5VV17 481 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 TXNRD3NBQ6F5E7 133 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 AADACL2Q6P093 401 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 BEND5Q7L4P6 421 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 STRADAQ7RTN6 431 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 EXD1Q8NHP7 514 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 ZNF461Q8TAF7 563 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 RBM41Q96IZ5 413 aaKnown RBP15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 CEP295NLQ96MC4 621 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 PEBP4Q96S96 227 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 TBCBQ99426 244 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 NPY6RQ99463 290 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 FBXO44Q9H4M3 255 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 ZWILCHQ9H900 591 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 RRN3Q9NYV6 651 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 IL37Q9NZH6 218 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 PCSK1NQ9UHG2 260 aa15.13■□□□□ 0.01
ARHGEF40-208ENST00000557498 GREB1Q4ZG55 1949 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 EFCAB8A8MWE9 144 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 C5orf67F2Z3F1 127 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 PRPSAP2O60256 369 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 SEC24AO95486 1093 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 NCAM1P13591 858 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 YWHAGP61981 247 aaKnown RBP eCLIP15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 ITIH3Q06033 890 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 C2orf54Q08AI8 447 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 ATP13A4Q4VNC1 1196 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 RAB6CQ53S08 254 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 SYPL2Q5VXT5 272 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 BSPRYQ5W0U4 402 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 FAM109BQ6ICB4 259 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 DENND5BQ6ZUT9 1274 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 BNIPLQ7Z465 357 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 STKLD1Q8NE28 680 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 SPATA4Q8NEY3 305 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 NT5C3BQ969T7 300 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 NAP1L3Q99457 506 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 C17orf80Q9BSJ5 609 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 ADAM33Q9BZ11 813 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 RAB6CQ9H0N0 254 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 KLHL11Q9NVR0 708 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 NAALADL1Q9UQQ1 740 aa15.12■□□□□ 0.01
ARHGEF40-208ENST00000557498 FAM92AA1XBS5 289 aa15.11■□□□□ 0.01
ARHGEF40-208ENST00000557498 SLC38A8A6NNN8 435 aa15.11■□□□□ 0.01
ARHGEF40-208ENST00000557498 GRXCR1A8MXD5 290 aa15.11■□□□□ 0.01
ARHGEF40-208ENST00000557498 TEX28O15482 410 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms