RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 RNF225M0QZC1 329 aaPredicted RBP16.72■□□□□ 0.27
TUBB3-214ENST00000557490 O00370 1275 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 CYP26A1O43174 497 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 OLFM2O95897 454 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 ZDHHC11BP0C7U3 371 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 TCF3P15923 654 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 PON1P27169 355 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 TUBP50607 506 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 ZNF132P52740 706 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 MLLT6P55198 1093 aaPredicted RBP16.72■□□□□ 0.27
TUBB3-214ENST00000557490 MYL5Q02045 173 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 TYRO3Q06418 890 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 BST2Q10589 180 aaKnown RBP16.72■□□□□ 0.27
TUBB3-214ENST00000557490 USP4Q13107 963 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 PDGFRLQ15198 375 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 ZNF77Q15935 545 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 MIIPQ5JXC2 388 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 LCLAT1Q6UWP7 414 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 PIGZQ86VD9 579 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 TTC30AQ86WT1 665 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 ANKRD20A12PQ8NF67 263 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 RUBCNQ92622 972 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 NAT10Q9H0A0 1025 aaKnown RBP16.72■□□□□ 0.27
TUBB3-214ENST00000557490 RNF38Q9H0F5 515 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 LTB4R2Q9NPC1 389 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 CPQQ9Y646 472 aa16.72■□□□□ 0.27
TUBB3-214ENST00000557490 GREB1Q4ZG55 1949 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 FAM170BA6NMN3 283 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 LEFTY2O00292 366 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 XPO1O14980 1071 aaKnown RBP16.71■□□□□ 0.27
TUBB3-214ENST00000557490 COCHO43405 550 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 SETSIPP0DME0 302 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 CD72P21854 359 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 BRD2P25440 801 aaKnown RBP16.71■□□□□ 0.27
TUBB3-214ENST00000557490 IFNAR2P48551 515 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 PDE4CQ08493 712 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 CNGA2Q16280 664 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 ARHGAP44Q17R89 818 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 ITPRIPL2Q3MIP1 535 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 GJB7Q6PEY0 223 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 C1orf228Q6PIY5 440 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 CCDC186Q7Z3E2 898 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 DDX42Q86XP3 938 aaKnown RBP eCLIP16.71■□□□□ 0.27
TUBB3-214ENST00000557490 PJA1Q8NG27 643 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 TTC8Q8TAM2 541 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 UBA3Q8TBC4 463 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 TFAP2BQ92481 460 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 FAM3CQ92520 227 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 FAM83CQ9BQN1 747 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 OSBPL6Q9BZF3 934 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 CCSER2Q9H7U1 834 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 FANCLQ9NW38 375 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 DUS2Q9NX74 493 aaKnown RBP16.71■□□□□ 0.27
TUBB3-214ENST00000557490 SMPD4Q9NXE4 827 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 TAB2Q9NYJ8 693 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 GTSE1Q9NYZ3 720 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 CNTN6Q9UQ52 1028 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 USP3Q9Y6I4 520 aa16.71■□□□□ 0.27
TUBB3-214ENST00000557490 A0A1W2PQH9 124 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 NCAM2O15394 837 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 TLR5O60602 858 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 USP8P40818 1118 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 PSEN1P49768 467 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 TNK2Q07912 1038 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 RUNX3Q13761 415 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 COL9A2Q14055 689 aaPredicted RBP16.7■□□□□ 0.26
TUBB3-214ENST00000557490 KLHL40Q2TBA0 621 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 CDKAL1Q5VV42 579 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 TRIM68Q6AZZ1 485 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 TADA2BQ86TJ2 420 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 ARHGAP18Q8N392 663 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 RIN3Q8TB24 985 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 OSCP1Q8WVF1 389 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 EBF3Q9H4W6 596 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 NAGPAQ9UK23 515 aa16.7■□□□□ 0.26
TUBB3-214ENST00000557490 RALYQ9UKM9 306 aaKnown RBP16.7■□□□□ 0.26
TUBB3-214ENST00000557490 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.7■□□□□ 0.26
TUBB3-214ENST00000557490 SPECC1L-ADORA2AF8WAN1 911 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 M0QYV0 167 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 MED7O43513 233 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 LETM1O95202 739 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-214ENST00000557490 DCNP07585 359 aaKnown RBP16.69■□□□□ 0.26
TUBB3-214ENST00000557490 RALAP11233 206 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 ARSAP15289 507 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 TARSP26639 723 aaKnown RBP16.69■□□□□ 0.26
TUBB3-214ENST00000557490 PLA2G4AP47712 749 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 PGFP49763 221 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 TKTL1P51854 596 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 AMPD2Q01433 879 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 APBA1Q02410 837 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 KRT31Q15323 416 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 RAB41Q5JT25 222 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 SMYD5Q6GMV2 418 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 RALGPS2Q86X27 583 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-214ENST00000557490 CPA6Q8N4T0 437 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 KIAA1958Q8N8K9 716 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 ATP2A3Q93084 1043 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 VPS16Q9H269 839 aa16.69■□□□□ 0.26
TUBB3-214ENST00000557490 SIX2Q9NPC8 291 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms