RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 CPXM1Q96SM3 734 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 CYP2S1Q96SQ9 504 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 COL25A1Q9BXS0 654 aaPredicted RBP15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 PLA2G2FQ9BZM2 168 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 MIS12Q9H081 205 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 CCSER2Q9H7U1 834 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 CNGB3Q9NQW8 809 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 NAGPAQ9UK23 515 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 CAPN11Q9UMQ6 739 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 CEP83Q9Y592 693 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 TICRRQ7Z2Z1 1910 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 COCHO43405 550 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 ECI2O75521 394 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 LSM8O95777 96 aaKnown RBP15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 PFKLP17858 780 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 HDCP19113 662 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 AVPR1AP37288 418 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 ACADSBP45954 432 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 TUBP50607 506 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 YWHAGP61981 247 aaKnown RBP eCLIP15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 NOMO3P69849 1222 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 PTPN20Q4JDL3 420 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 HECTD3Q5T447 861 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 VITQ6UXI7 678 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 HFE2Q6ZVN8 426 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 FMNL3Q8IVF7 1028 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 TMEM35BQ8NCS4 154 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 OLIG1Q8TAK6 271 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 RIN3Q8TB24 985 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 ELSPBP1Q96BH3 223 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 PCDHB18PQ96TA0 734 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 SYT11Q9BT88 431 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 RNF38Q9H0F5 515 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 SMOC2Q9H3U7 446 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 ZFP14Q9HCL3 533 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 CYLDQ9NQC7 956 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 AIPL1Q9NZN9 384 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 MUTYHQ9UIF7 546 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 CCL26Q9Y258 94 aa15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.6■□□□□ 0.09
VIPAS39-210ENST00000557466 YJEFN3A6XGL0 299 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 HEPACAM2A8MVW5 462 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 E7ENQ6 273 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 PAPSS1O43252 624 aaPredicted RBP15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 TLR5O60602 858 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 FBXO21O94952 628 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 ERBB2P04626 1255 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 CYP1A1P04798 512 aaPredicted RBP15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 CCDC172P0C7W6 258 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 RARGP13631 454 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 CASP14P31944 242 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 PRKCIP41743 596 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 PSEN1P49768 467 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 ZNF75DP51815 510 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 ZBED6P86452 979 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 TRIM14Q14142 442 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 GRM2Q14416 872 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 ZNF268Q14587 947 aaPredicted RBP15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 NAA35Q5VZE5 725 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 TMEM110Q86TL2 294 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 ARHGAP18Q8N392 663 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 IRGQQ8WZA9 623 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 KHSRPQ92945 711 aaKnown RBP eCLIP15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 NXPE3Q969Y0 559 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 PPP1R13BQ96KQ4 1090 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 LRRC3BQ96PB8 259 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 NOX5Q96PH1 765 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 AGPAT1Q99943 283 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 KIF9Q9HAQ2 790 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 CLIC5Q9NZA1 410 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 NUDT5Q9UKK9 219 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 SORCS3Q9UPU3 1222 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 LUC7L2Q9Y383 392 aaKnown RBP15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 COL4A3Q01955 1670 aa15.59■□□□□ 0.09
VIPAS39-210ENST00000557466 MDM4O15151 490 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 NARSO43776 548 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 MBL2P11226 248 aaPredicted RBP15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 RALAP11233 206 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 SLC7A9P82251 487 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 USP4Q13107 963 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 TDGQ13569 410 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 TRIM72Q6ZMU5 477 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 TMC6Q7Z403 805 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 SCUBE3Q8IX30 993 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 SLC44A3Q8N4M1 653 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 CELF5Q8N6W0 485 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 ZNF397Q8NF99 534 aaPredicted RBP15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 IPO4Q8TEX9 1081 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 E2F7Q96AV8 911 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 PIWIL1Q96J94 861 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 NUCKS1Q9H1E3 243 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 TDP1Q9NUW8 608 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 SEPT11Q9NVA2 429 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 SMPD4Q9NXE4 827 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 OBP2AQ9NY56 170 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 ARHGAP26Q9UNA1 814 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 CPQQ9Y646 472 aa15.58■□□□□ 0.08
VIPAS39-210ENST00000557466 DPYSL4O14531 572 aa15.57■□□□□ 0.08
VIPAS39-210ENST00000557466 TBX18O95935 607 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms