RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 SNX14Q9Y5W7 946 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 NBPF19A0A087WUL8 3843 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 C2CD3Q4AC94 2353 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 BOD1L1Q8NFC6 3051 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 KLK10O43240 276 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 KRT38O76015 456 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 MBL2P11226 248 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-220ENST00000557037 GLDCP23378 1020 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 KRT2P35908 639 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 CCT6AP40227 531 aaKnown RBP13.38□□□□□ -0.27
PSEN1-220ENST00000557037 ACADVLP49748 655 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 TPMTP51580 245 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 MAPK7Q13164 816 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 TOB2Q14106 344 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-220ENST00000557037 TEAD4Q15561 434 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 FUT11Q495W5 492 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 C4orf17Q53FE4 359 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 PRAMEF14Q5SWL7 426 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 ZPBP2Q6X784 338 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 TMEM25Q86YD3 366 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 SPATA2LQ8IUW3 424 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-220ENST00000557037 LEO1Q8WVC0 666 aaPredicted RBP13.38□□□□□ -0.27
PSEN1-220ENST00000557037 MKRN2Q9H000 416 aaKnown RBP13.38□□□□□ -0.27
PSEN1-220ENST00000557037 DNAJC17Q9NVM6 304 aaKnown RBP13.38□□□□□ -0.27
PSEN1-220ENST00000557037 USP36Q9P275 1121 aaKnown RBP13.38□□□□□ -0.27
PSEN1-220ENST00000557037 TBC1D14Q9P2M4 693 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 KIAA1024Q9UPX6 916 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 PAXBP1Q9Y5B6 917 aa13.38□□□□□ -0.27
PSEN1-220ENST00000557037 ZNF840PA6NDX5 716 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 PRRT4C9JH25 899 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 HOXC11O43248 304 aaPredicted RBP13.37□□□□□ -0.27
PSEN1-220ENST00000557037 HCRTO43612 131 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 C1SP09871 688 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 MAPTP10636 758 aaKnown RBP13.37□□□□□ -0.27
PSEN1-220ENST00000557037 CDK4P11802 303 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 MCM7P33993 719 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 INTS6LQ5JSJ4 861 aaKnown RBP13.37□□□□□ -0.27
PSEN1-220ENST00000557037 METTL3Q86U44 580 aaKnown RBP13.37□□□□□ -0.27
PSEN1-220ENST00000557037 PDCL2Q8N4E4 241 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 KIAA1958Q8N8K9 716 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
PSEN1-220ENST00000557037 TMEM161BQ8NDZ6 487 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 SCFD1Q8WVM8 642 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 KCNE4Q8WWG9 221 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 PKMYT1Q99640 499 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 TM9SF3Q9HD45 589 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 DDX43Q9NXZ2 648 aaKnown RBP13.37□□□□□ -0.27
PSEN1-220ENST00000557037 SRPK3Q9UPE1 567 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 CENPEQ02224 2701 aa13.37□□□□□ -0.27
PSEN1-220ENST00000557037 ITPR3Q14573 2671 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 ITPR2Q14571 2701 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 FAM189A1O60320 539 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 ADRB2P07550 413 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 PFKLP17858 780 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 OXTRP30559 389 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 RAD51AP2Q09MP3 1159 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 UBAP2LQ14157 1087 aaKnown RBP13.36□□□□□ -0.27
PSEN1-220ENST00000557037 ATG14Q6ZNE5 492 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 BBS7Q8IWZ6 715 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 DHX40Q8IX18 779 aaKnown RBP13.36□□□□□ -0.27
PSEN1-220ENST00000557037 EID2Q8N6I1 236 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 EXD3Q8N9H8 876 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 KCNB2Q92953 911 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 HIC2Q96JB3 615 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 TSPAN18Q96SJ8 248 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 TRIM9Q9C026 710 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 CCSER1Q9C0I3 900 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 C6orf106Q9H6K1 298 aaPredicted RBP13.36□□□□□ -0.27
PSEN1-220ENST00000557037 DDX19AQ9NUU7 478 aaKnown RBP13.36□□□□□ -0.27
PSEN1-220ENST00000557037 DPP3Q9NY33 737 aa13.36□□□□□ -0.27
PSEN1-220ENST00000557037 E9PMD0 336 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 LAD1O00515 517 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 OGTO15294 1046 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 OLFM2O95897 454 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 CTSKP43235 329 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 STARD3Q14849 445 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 SV2CQ496J9 727 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 KDM7AQ6ZMT4 941 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 OSTM1Q86WC4 334 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 DDX42Q86XP3 938 aaKnown RBP eCLIP13.35□□□□□ -0.27
PSEN1-220ENST00000557037 TMPRSS6Q8IU80 811 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 WBP2Q969T9 261 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 SIPA1Q96FS4 1042 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 NUP58Q9BVL2 599 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 SPHK2Q9NRA0 654 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 L1RE1Q9UN81 338 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 CLCA2Q9UQC9 943 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 STON1Q9Y6Q2 735 aa13.35□□□□□ -0.27
PSEN1-220ENST00000557037 ARID1BQ8NFD5 2236 aaPredicted RBP13.34□□□□□ -0.27
PSEN1-220ENST00000557037 A0A1B0GTQ1 180 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 TULP1O00294 542 aaPredicted RBP13.34□□□□□ -0.27
PSEN1-220ENST00000557037 TRAK2O60296 914 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 OAS1P00973 400 aaKnown RBP13.34□□□□□ -0.27
PSEN1-220ENST00000557037 MPOP05164 745 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 GRIA4P48058 902 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 LIG4P49917 911 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 FOSBP53539 338 aa13.34□□□□□ -0.27
PSEN1-220ENST00000557037 MYL7Q01449 175 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms