RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 OSCP1Q8WVF1 389 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 ZFRQ96KR1 1074 aaKnown RBP24.07■■□□□ 1.44
TDP1-216ENST00000556867 OSER1Q9NX31 292 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 DUS2Q9NX74 493 aaKnown RBP24.07■■□□□ 1.44
TDP1-216ENST00000556867 SMPD4Q9NXE4 827 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 DLGAP2Q9P1A6 1054 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 A0A1W2PQH9 124 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 FAM170BA6NMN3 283 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 BECN2A8MW95 431 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 CALCAP01258 141 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 CTHP32929 405 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 IFNAR2P48551 515 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 TKTL1P51854 596 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 KCNMA1Q12791 1236 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 RUNX3Q13761 415 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 NCAPHQ15003 741 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 ARHGAP44Q17R89 818 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 SCD5Q86SK9 330 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 RALGPS2Q86X27 583 aaPredicted RBP24.06■■□□□ 1.44
TDP1-216ENST00000556867 ZNF687Q8N1G0 1237 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 TTC16Q8NEE8 873 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 KCTD13Q8WZ19 329 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 FAM3CQ92520 227 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 NAT10Q9H0A0 1025 aaKnown RBP24.06■■□□□ 1.44
TDP1-216ENST00000556867 EBF3Q9H4W6 596 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.06■■□□□ 1.44
TDP1-216ENST00000556867 AJAP1Q9UKB5 411 aaPredicted RBP24.06■■□□□ 1.44
TDP1-216ENST00000556867 MTF2Q9Y483 593 aaPredicted RBP24.06■■□□□ 1.44
TDP1-216ENST00000556867 WNT6Q9Y6F9 365 aa24.06■■□□□ 1.44
TDP1-216ENST00000556867 SPECC1L-ADORA2AF8WAN1 911 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 M0QYV0 167 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 GALR2O43603 387 aaPredicted RBP24.05■■□□□ 1.44
TDP1-216ENST00000556867 DCNP07585 359 aaKnown RBP24.05■■□□□ 1.44
TDP1-216ENST00000556867 ARSAP15289 507 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 ZNF18P17022 549 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 SOX9P48436 509 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 MEA1Q16626 185 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 EML3Q32P44 896 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 ANO6Q4KMQ2 910 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 PM20D1Q6GTS8 502 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 KLHDC10Q6PID8 442 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 ZNF276Q8N554 614 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 PRSS33Q8NF86 280 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 SLC35F5Q8WV83 523 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 ATP2A3Q93084 1043 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 BPIFA3Q9BQP9 254 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 NACA2Q9H009 215 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 LRRC4Q9HBW1 653 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 CLIC5Q9NZA1 410 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 CFAP97Q9P2B7 532 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 NAGPAQ9UK23 515 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 DNAJC12Q9UKB3 198 aa24.05■■□□□ 1.44
TDP1-216ENST00000556867 ZBED1O96006 694 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 TPM2P07951 284 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 RARGP13631 454 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 ARHGAP18Q8N392 663 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 CPA6Q8N4T0 437 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 AOPEPQ8N6M6 819 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 DTWD2Q8NBA8 298 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 TTC8Q8TAM2 541 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 SECISBP2LQ93073 1101 aaKnown RBP24.04■■□□□ 1.44
TDP1-216ENST00000556867 CLDN23Q96B33 292 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 ULBP1Q9BZM6 244 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 VPS16Q9H269 839 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 HSD3B7Q9H2F3 369 aa24.04■■□□□ 1.44
TDP1-216ENST00000556867 LIMA1Q9UHB6 759 aaKnown RBP24.04■■□□□ 1.44
TDP1-216ENST00000556867 OTOL1A6NHN0 477 aaPredicted RBP24.03■■□□□ 1.44
TDP1-216ENST00000556867 MED7O43513 233 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 LETM1O95202 739 aaPredicted RBP24.03■■□□□ 1.44
TDP1-216ENST00000556867 GNA15P30679 374 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 ATP5C1P36542 298 aaKnown RBP24.03■■□□□ 1.44
TDP1-216ENST00000556867 MAGEA9P43362 315 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 ADIGQ0VDE8 80 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 TXNDC11Q6PKC3 985 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 TADA2BQ86TJ2 420 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 SCML4Q8N228 414 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 ANKRD20A12PQ8NF67 263 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 CDK5RAP1Q96SZ6 601 aaKnown RBP24.03■■□□□ 1.44
TDP1-216ENST00000556867 FUCA2Q9BTY2 467 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 ECT2Q9H8V3 914 aa24.03■■□□□ 1.44
TDP1-216ENST00000556867 NDRG2Q9UN36 371 aaKnown RBP24.03■■□□□ 1.44
TDP1-216ENST00000556867 E2F8A0AVK6 867 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 SLC9A3R1O14745 358 aaPredicted RBP24.02■■□□□ 1.44
TDP1-216ENST00000556867 NCAM2O15394 837 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 TBX18O95935 607 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 RALAP11233 206 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 USP8P40818 1118 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 RPS9P46781 194 aaKnown RBP24.02■■□□□ 1.44
TDP1-216ENST00000556867 COPB1P53618 953 aaKnown RBP24.02■■□□□ 1.44
TDP1-216ENST00000556867 FZD5Q13467 585 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 KLHDC7AQ5VTJ3 777 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 PMF1Q6P1K2 205 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 BHLHA9Q7RTU4 235 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 SIX6OS1Q8N1H7 587 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 ZNF606Q8WXB4 792 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 HSFY1Q96LI6 401 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 LSM14BQ9BX40 385 aaKnown RBP24.02■■□□□ 1.44
TDP1-216ENST00000556867 KLF16Q9BXK1 252 aaPredicted RBP24.02■■□□□ 1.44
TDP1-216ENST00000556867 LINC00597Q9H2U6 94 aa24.02■■□□□ 1.44
TDP1-216ENST00000556867 PLCB1Q9NQ66 1216 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms