RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NIF3L1Q9GZT8 377 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 ECT2Q9H8V3 914 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 COMMD8Q9NX08 183 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 ARHGAP26Q9UNA1 814 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 C2orf78A6NCI8 922 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TK2O00142 265 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 FAM200BP0CF97 657 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TRIM49P0CI25 452 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TRIM49CP0CI26 452 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 PRCPP42785 496 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 RAP1GAPP47736 663 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 MXI1P50539 228 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 GOLGA8FQ08AF8 430 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 GOLGA8DPQ0D2H9 430 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 FZD5Q13467 585 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 PREPLQ4J6C6 727 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 DCAF17Q5H9S7 520 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 HECTD3Q5T447 861 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TRIM68Q6AZZ1 485 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 FAM35AQ86V20 835 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 ELOA2Q8IYF1 753 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 SMYD4Q8IYR2 804 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 MAML2Q8IZL2 1156 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 GPR161Q8N6U8 529 aaKnown RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 KIAA1958Q8N8K9 716 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 SLC2A14Q8TDB8 520 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TAS1R2Q8TE23 839 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 CYFIP2Q96F07 1278 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 HEXIM2Q96MH2 286 aaKnown RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 KCNK16Q96T55 309 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 P2RY13Q9BPV8 354 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 FAM124BQ9H5Z6 455 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 METTL14Q9HCE5 456 aaKnown RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.75□□□□□ -1.173e-6■■■■■ 28.8
SCFD1-222ENST00000556768 KRT82Q9NSB4 513 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 RAB20Q9NX57 234 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TBC1D14Q9P2M4 693 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 NCDNQ9UBB6 729 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 ARMCX3Q9UH62 379 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 CHORDC1Q9UHD1 332 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 PCDHA5Q9Y5H7 936 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 DOCK8Q8NF50 2099 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 EP300Q09472 2414 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 BICDL2A1A5D9 508 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TRDMT1O14717 391 aaKnown RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 SLC16A3O15427 465 aaKnown RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 MBL2P11226 248 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 CD58P19256 250 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 CNR2P34972 360 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 SLC5A3P53794 718 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 MAP3K7CLP57077 242 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 YWHAEP62258 255 aaKnown RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 SLC7A9P82251 487 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 PPP3CAQ08209 521 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 CCINQ13939 588 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 COBLL1Q53SF7 1204 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 SPOPLQ6IQ16 392 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TXNDC11Q6PKC3 985 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TSSK4Q6SA08 328 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TADA2BQ86TJ2 420 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 ZNF687Q8N1G0 1237 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 C12orf29Q8N999 325 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 ZBTB44Q8NCP5 570 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 ENGASEQ8NFI3 743 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 DHTKD1Q96HY7 919 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 SLC22A12Q96S37 553 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 PRMT8Q9NR22 394 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 TLR8Q9NR97 1041 aaKnown RBP7.75□□□□□ -1.17
SCFD1-222ENST00000556768 GCNT4Q9P109 453 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 SLC8A2Q9UPR5 921 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 SH3BP1Q9Y3L3 701 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 CPQQ9Y646 472 aa7.75□□□□□ -1.17
SCFD1-222ENST00000556768 NCANO14594 1321 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 LEFTY2O00292 366 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 TADA3O75528 432 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 FGFR1OPO95684 399 aaKnown RBP7.74□□□□□ -1.17
SCFD1-222ENST00000556768 ADH1CP00326 375 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 CCDC130P13994 396 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 ARSAP15289 507 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 ADORA2BP29275 332 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 GJA4P35212 333 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 ASPAP45381 313 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 TUBP50607 506 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 GALK1P51570 392 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 INCA1Q0VD86 236 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 ZNF77Q15935 545 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 ZCWPW2Q504Y3 356 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 TMEM196Q5HYL7 178 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 BTBD8Q5XKL5 378 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 ANKRD40Q6AI12 368 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 FUKQ8N0W3 1084 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 SCAMP5Q8TAC9 235 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 SPATA20Q8TB22 786 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 CD101Q93033 1021 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 HNRNPABQ99729 332 aaKnown RBP7.74□□□□□ -1.17
SCFD1-222ENST00000556768 HPS4Q9NQG7 708 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 RBM12Q9NTZ6 932 aaKnown RBP7.74□□□□□ -1.17
SCFD1-222ENST00000556768 FAM49BQ9NUQ9 324 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 SMPD4Q9NXE4 827 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 GMEB2Q9UKD1 530 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms