RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 CNGA2Q16280 664 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 STX1AQ16623 288 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 MEA1Q16626 185 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 GOLGA7BQ2TAP0 167 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 EML3Q32P44 896 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 VWA3BQ502W6 1294 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 PKDCCQ504Y2 493 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 MIIPQ5JXC2 388 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 KLHDC10Q6PID8 442 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 PIGZQ86VD9 579 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
IFT43-212ENST00000556742 ZFRQ96KR1 1074 aaKnown RBP11.31□□□□□ -0.6
IFT43-212ENST00000556742 CDK5RAP1Q96SZ6 601 aaKnown RBP11.31□□□□□ -0.6
IFT43-212ENST00000556742 CRACR2AQ9BSW2 395 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 EBF3Q9H4W6 596 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 CCSER2Q9H7U1 834 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
IFT43-212ENST00000556742 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
IFT43-212ENST00000556742 DUS2Q9NX74 493 aaKnown RBP11.31□□□□□ -0.6
IFT43-212ENST00000556742 CLIC5Q9NZA1 410 aa11.31□□□□□ -0.6
IFT43-212ENST00000556742 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
IFT43-212ENST00000556742 MTF2Q9Y483 593 aaPredicted RBP11.31□□□□□ -0.6
IFT43-212ENST00000556742 ZFHX2Q9C0A1 2572 aaPredicted RBP11.3□□□□□ -0.6
IFT43-212ENST00000556742 E2F8A0AVK6 867 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 CYP26A1O43174 497 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 NFATC1O95644 943 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 MBL2P11226 248 aaPredicted RBP11.3□□□□□ -0.6
IFT43-212ENST00000556742 SLC9A1P19634 815 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 PON1P27169 355 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 ATP5C1P36542 298 aaKnown RBP11.3□□□□□ -0.6
IFT43-212ENST00000556742 NHLH1Q02575 133 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 PDE4CQ08493 712 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 LRRC32Q14392 662 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 TCP11X2Q5H9J9 407 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 CDKAL1Q5VV42 579 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 TRIM68Q6AZZ1 485 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 PM20D1Q6GTS8 502 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 TXNDC11Q6PKC3 985 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 TADA2BQ86TJ2 420 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 SCML4Q8N228 414 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 ARHGAP18Q8N392 663 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 CPA6Q8N4T0 437 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 KCTD13Q8WZ19 329 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 EXOC4Q96A65 974 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 OTUB2Q96DC9 234 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 FAM122AQ96E09 287 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 ECT2Q9H8V3 914 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 NMUR1Q9HB89 426 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.3□□□□□ -0.6
IFT43-212ENST00000556742 TBC1D14Q9P2M4 693 aa11.3□□□□□ -0.6
IFT43-212ENST00000556742 OTOL1A6NHN0 477 aaPredicted RBP11.29□□□□□ -0.6
IFT43-212ENST00000556742 TRDMT1O14717 391 aaKnown RBP11.29□□□□□ -0.6
IFT43-212ENST00000556742 ZBED1O96006 694 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 CHRNB1P11230 501 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 RARGP13631 454 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 GJA4P35212 333 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 SOX9P48436 509 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 PGFP49763 221 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 TKTL1P51854 596 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 GOLGA8FQ08AF8 430 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 GOLGA8DPQ0D2H9 430 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 NR1H3Q13133 447 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 CCINQ13939 588 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 ANGPT1Q15389 498 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 DGKKQ5KSL6 1271 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 SCD5Q86SK9 330 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 C1orf210Q8IVY1 113 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 SYNPOQ8N3V7 929 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 SLC35F5Q8WV83 523 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 TFAP2BQ92481 460 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 SHC3Q92529 594 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 CHFRQ96EP1 664 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 NACA2Q9H009 215 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 CHRDQ9H2X0 955 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 LRRC4Q9HBW1 653 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 CNGB3Q9NQW8 809 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 OSER1Q9NX31 292 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 SMPD4Q9NXE4 827 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 TMEM63CQ9P1W3 806 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 CFAP97Q9P2B7 532 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 NAGPAQ9UK23 515 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 NDRG2Q9UN36 371 aaKnown RBP11.29□□□□□ -0.6
IFT43-212ENST00000556742 WNT6Q9Y6F9 365 aa11.29□□□□□ -0.6
IFT43-212ENST00000556742 EML5Q05BV3 1969 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 MYO18AQ92614 2054 aaKnown RBP11.28□□□□□ -0.6
IFT43-212ENST00000556742 A0A1W2PQH9 124 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 H0Y858 1186 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 TULP2O00295 520 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 MED7O43513 233 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 RALAP11233 206 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 KRT5P13647 590 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 ARSAP15289 507 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 PTMSP20962 102 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 MYL5Q02045 173 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 HSP90AA4PQ58FG1 418 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 TMEM196Q5HYL7 178 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 C11orf57Q6ZUT1 292 aaPredicted RBP11.28□□□□□ -0.6
IFT43-212ENST00000556742 ADGRG2Q8IZP9 1017 aa11.28□□□□□ -0.6
IFT43-212ENST00000556742 TTC16Q8NEE8 873 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms