RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SCML2Q9UQR0 700 aa10.19□□□□□ -0.78
SRP54-210ENST00000556380 HEPACAM2A8MVW5 462 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 ARNTLO00327 626 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 CAVIN2O95810 425 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 OLFM2O95897 454 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 OAS1P00973 400 aaKnown RBP10.18□□□□□ -0.78
SRP54-210ENST00000556380 KRT5P13647 590 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 UCHL3P15374 230 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 PFKLP17858 780 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 CDK11BP21127 795 aaKnown RBP10.18□□□□□ -0.78
SRP54-210ENST00000556380 BRD2P25440 801 aaKnown RBP10.18□□□□□ -0.78
SRP54-210ENST00000556380 CLCN1P35523 988 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 RPL34P49207 117 aaKnown RBP10.18□□□□□ -0.78
SRP54-210ENST00000556380 ZXDBP98169 803 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 PDE4CQ08493 712 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 FCHO2Q0JRZ9 810 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 ZNF268Q14587 947 aaPredicted RBP10.18□□□□□ -0.78
SRP54-210ENST00000556380 ARHGAP44Q17R89 818 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 GOLGA7BQ2TAP0 167 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 PM20D1Q6GTS8 502 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 SCD5Q86SK9 330 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 PIGZQ86VD9 579 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 RIN3Q8TB24 985 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 UBA3Q8TBC4 463 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 ZNF606Q8WXB4 792 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 FBXO32Q969P5 355 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 SLITRK1Q96PX8 696 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 LSM14BQ9BX40 385 aaKnown RBP10.18□□□□□ -0.78
SRP54-210ENST00000556380 RNF38Q9H0F5 515 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 SMG9Q9H0W8 520 aaKnown RBP10.18□□□□□ -0.78
SRP54-210ENST00000556380 GANQ9H2C0 597 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 FBXO44Q9H4M3 255 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 SLITRK6Q9H5Y7 841 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 WNT16Q9UBV4 365 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 CCL26Q9Y258 94 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 FHOD1Q9Y613 1164 aa10.18□□□□□ -0.78
SRP54-210ENST00000556380 TRAV19A0A0A6YYK7 116 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 TMEM221A6NGB7 291 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 SHISA7A6NL88 538 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 M0R296 226 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 PES1O00541 588 aaKnown RBP10.17□□□□□ -0.78
SRP54-210ENST00000556380 XPO1O14980 1071 aaKnown RBP10.17□□□□□ -0.78
SRP54-210ENST00000556380 EPHB6O15197 1021 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 CYP26A1O43174 497 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 TEX33O43247 280 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 PNMA6AP0CW24 399 aaPredicted RBP10.17□□□□□ -0.78
SRP54-210ENST00000556380 SETSIPP0DME0 302 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 TCF3P15923 654 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 PSMC3P17980 439 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 HDCP19113 662 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 GPD2P43304 727 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 PLA2G4AP47712 749 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 BCAT1P54687 386 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 SLC7A9P82251 487 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 BST2Q10589 180 aaKnown RBP10.17□□□□□ -0.78
SRP54-210ENST00000556380 DRAP1Q14919 205 aaPredicted RBP10.17□□□□□ -0.78
SRP54-210ENST00000556380 SYCP1Q15431 976 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 STILQ15468 1287 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 MEA1Q16626 185 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 FKBP15Q5T1M5 1219 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 PMF1Q6P1K2 205 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 BHLHA9Q7RTU4 235 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 CCDC186Q7Z3E2 898 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 BMP8AQ7Z5Y6 402 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 LUZP1Q86V48 1076 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 ZNF276Q8N554 614 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 CELF5Q8N6W0 485 aaKnown RBP10.17□□□□□ -0.78
SRP54-210ENST00000556380 ARL14EPQ8N8R7 260 aaPredicted RBP10.17□□□□□ -0.78
SRP54-210ENST00000556380 PDZD8Q8NEN9 1154 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 ANKRD20A12PQ8NF67 263 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 DEPDC1BQ8WUY9 529 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 KCTD13Q8WZ19 329 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 NAP1L5Q96NT1 182 aaPredicted RBP10.17□□□□□ -0.78
SRP54-210ENST00000556380 ERGIC2Q96RQ1 377 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 STK33Q9BYT3 514 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 NMUR1Q9HB89 426 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 TRPV5Q9NQA5 729 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 TDP1Q9NUW8 608 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 OSER1Q9NX31 292 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 GMIPQ9P107 970 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 ARHGAP26Q9UNA1 814 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 CACNA1HO95180 2353 aa10.17□□□□□ -0.78
SRP54-210ENST00000556380 MUC6Q6W4X9 2439 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 DENND4CQ5VZ89 1909 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 A0A1B0GTH6 734 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 KRBA1A5PL33 1030 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 FAM86C2PA6NEL3 165 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 TPM2P07951 284 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 USP17L7P0C7H9 530 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 RFX1P22670 979 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 GNA15P30679 374 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 AVPR1AP37288 418 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 TUBP50607 506 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 JAM2P57087 298 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 UBXN1Q04323 297 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 IFRD2Q12894 506 aaPredicted RBP10.16□□□□□ -0.78
SRP54-210ENST00000556380 GRM2Q14416 872 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 NR1I3Q14994 352 aa10.16□□□□□ -0.78
SRP54-210ENST00000556380 HECTD3Q5T447 861 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms