RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 AMPD2Q01433 879 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 PDE4CQ08493 712 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 FZD5Q13467 585 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 LRRC32Q14392 662 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 STX1AQ16623 288 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 PKDCCQ504Y2 493 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 SMYD5Q6GMV2 418 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 SASS6Q6UVJ0 657 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 LCLAT1Q6UWP7 414 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 C1orf210Q8IVY1 113 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 TFAP2BQ92481 460 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 CHFRQ96EP1 664 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 TUBGCP2Q9BSJ2 902 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 NACA2Q9H009 215 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 CHRDQ9H2X0 955 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 NDST4Q9H3R1 872 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 ECT2Q9H8V3 914 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 NMUR1Q9HB89 426 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 UBE2TQ9NPD8 197 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-206ENST00000556375 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
SLIRP-206ENST00000556375 ANO10Q9NW15 660 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 OSER1Q9NX31 292 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 CFAP97Q9P2B7 532 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 APEX2Q9UBZ4 518 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.14□□□□□ -0.47
SLIRP-206ENST00000556375 NFE2L3Q9Y4A8 694 aa12.14□□□□□ -0.47
SLIRP-206ENST00000556375 VPS13AQ96RL7 3174 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 A0A1W2PQH9 124 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 E2F8A0AVK6 867 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 RNF225M0QZC1 329 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-206ENST00000556375 TULP2O00295 520 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 CHRNB1P11230 501 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 KRT5P13647 590 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 SLC9A1P19634 815 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
SLIRP-206ENST00000556375 PON1P27169 355 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 GJA4P35212 333 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 PLA2G4AP47712 749 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 MFAP3P55082 362 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 PON2Q15165 354 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 CNGA2Q16280 664 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 VWA3BQ502W6 1294 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 HSP90AA4PQ58FG1 418 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 MIIPQ5JXC2 388 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 KLHDC10Q6PID8 442 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 C11orf57Q6ZUT1 292 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-206ENST00000556375 SCD5Q86SK9 330 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 TADA2BQ86TJ2 420 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 ARHGAP18Q8N392 663 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 ZNF276Q8N554 614 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 CDK5RAP1Q96SZ6 601 aaKnown RBP12.13□□□□□ -0.47
SLIRP-206ENST00000556375 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
SLIRP-206ENST00000556375 SPATA6Q9NWH7 488 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-206ENST00000556375 CLIC5Q9NZA1 410 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 NAGPAQ9UK23 515 aa12.13□□□□□ -0.47
SLIRP-206ENST00000556375 MYOFQ9NZM1 2061 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 M0QYV0 167 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 LAMTOR5O43504 91 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 ZBED1O96006 694 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 RALAP11233 206 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 RARGP13631 454 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 ATP5C1P36542 298 aaKnown RBP12.12□□□□□ -0.47
SLIRP-206ENST00000556375 TKTL1P51854 596 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 GOLGA8FQ08AF8 430 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 GOLGA8DPQ0D2H9 430 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 ADIGQ0VDE8 80 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 NR1H3Q13133 447 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 CCINQ13939 588 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 MEA1Q16626 185 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 TMEM196Q5HYL7 178 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 DGKKQ5KSL6 1271 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 CDKAL1Q5VV42 579 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 GJB7Q6PEY0 223 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 SIX6OS1Q8N1H7 587 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 KCTD13Q8WZ19 329 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 SHC3Q92529 594 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 ATOH1Q92858 354 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-206ENST00000556375 EXOC4Q96A65 974 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 OTUB2Q96DC9 234 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 ULBP1Q9BZM6 244 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 LINC00597Q9H2U6 94 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 LMAN1LQ9HAT1 526 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 LRRC4Q9HBW1 653 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 PRMT8Q9NR22 394 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-206ENST00000556375 FAM86C1Q9NVL1 165 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 TMEM63CQ9P1W3 806 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 TBC1D14Q9P2M4 693 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 SH3BP1Q9Y3L3 701 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 MYO15AQ9UKN7 3530 aa12.12□□□□□ -0.47
SLIRP-206ENST00000556375 TRDMT1O14717 391 aaKnown RBP12.11□□□□□ -0.47
SLIRP-206ENST00000556375 SCAMP3O14828 347 aaKnown RBP12.11□□□□□ -0.47
SLIRP-206ENST00000556375 TBX18O95935 607 aa12.11□□□□□ -0.47
SLIRP-206ENST00000556375 CALCAP01258 141 aa12.11□□□□□ -0.47
SLIRP-206ENST00000556375 CYP17A1P05093 508 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms