RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 BUB1BO60566 1050 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 CLASP2O75122 1294 aaKnown RBP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 DAB1O75553 588 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 ARHGEF15O94989 841 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 CSPG5O95196 566 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 SEC24AO95486 1093 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 F9P00740 461 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 C8AP07357 584 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 DNAJB1P25685 340 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 HOXA9P31269 272 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 RFC1P35251 1148 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 CETN2P41208 172 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 MATKP42679 507 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 CLCN4P51793 760 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 CDR1P51861 262 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 ZNF143P52747 638 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 YWHAGP61981 247 aaKnown RBP eCLIP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 TWF1Q12792 350 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 TUBB2AQ13885 445 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 RPS6KA1Q15418 735 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 DCAF6Q58WW2 860 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 PPP1R15BQ5SWA1 713 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 BSPRYQ5W0U4 402 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 LILRA6Q6PI73 481 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 NYAP1Q6ZVC0 841 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 RSRC2Q7L4I2 434 aaKnown RBP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 SLFN11Q7Z7L1 901 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 SLC35F6Q8N357 371 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 LEMD2Q8NC56 503 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 ZNF592Q92610 1267 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 CASP10Q92851 521 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 MRPL38Q96DV4 380 aaKnown RBP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 NAPGQ99747 312 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 DDX23Q9BUQ8 820 aaKnown RBP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 TUBB2BQ9BVA1 445 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 PRO3102Q9H379 93 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 ZNF576Q9H609 170 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 IL37Q9NZH6 218 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 TRPM5Q9NZQ8 1165 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 DNAI1Q9UI46 699 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 TMEM59LQ9UK28 342 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 MAGED2Q9UNF1 606 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-218ENST00000556343 ALG6Q9Y672 507 aa9.65□□□□□ -0.86
ACTN1-218ENST00000556343 A0A0U1RQJ8 604 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 FAM92AA1XBS5 289 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 CCDC66A2RUB6 948 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 GRID2IPA4D2P6 1211 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 C2CD4BA6NLJ0 364 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 DPYSL4O14531 572 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 GRAP2O75791 330 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 VNN2O95498 520 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 ABL1P00519 1130 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 KRT7P08729 469 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 NCAM1P13591 858 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 COMTP21964 271 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 PCK1P35558 622 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 IRS1P35568 1242 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 PTPN9P43378 593 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 GPR15P49685 360 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 KPNA1P52294 538 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-218ENST00000556343 RPL7AP62424 266 aaKnown RBP9.64□□□□□ -0.87
ACTN1-218ENST00000556343 TAF10Q12962 218 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 CLUL1Q15846 466 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 SLC25A52Q3SY17 297 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 ZFYVE27Q5T4F4 411 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 SDHAF4Q5VUM1 108 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 CC2D1AQ6P1N0 951 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-218ENST00000556343 SYT10Q6XYQ8 523 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 STRADAQ7RTN6 431 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 DNAJB7Q7Z6W7 309 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-218ENST00000556343 RHOT1Q8IXI2 618 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 DEFB106AQ8N104 65 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 NIPA2Q8N8Q9 360 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 SCAMP5Q8TAC9 235 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 SLC7A14Q8TBB6 771 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 GDPD5Q8WTR4 605 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 CLEC4CQ8WTT0 213 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 ATRIPQ8WXE1 791 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 PSMG2Q969U7 264 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 TRMT2BQ96GJ1 504 aaKnown RBP9.64□□□□□ -0.87
ACTN1-218ENST00000556343 MYRFLQ96LU7 910 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 SLC2A13Q96QE2 648 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 TTLL2Q9BWV7 592 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 NACA2Q9H009 215 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 NSUN3Q9H649 340 aaKnown RBP9.64□□□□□ -0.87
ACTN1-218ENST00000556343 DZANK1Q9NVP4 752 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 ZDHHC7Q9NXF8 308 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 CLIC5Q9NZA1 410 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 TJP2Q9UDY2 1190 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 CHORDC1Q9UHD1 332 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-218ENST00000556343 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 COG5Q9UP83 839 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 USTQ9Y2C2 406 aa9.64□□□□□ -0.87
ACTN1-218ENST00000556343 YJEFN3A6XGL0 299 aa9.63□□□□□ -0.87
ACTN1-218ENST00000556343 E7ENQ6 273 aa9.63□□□□□ -0.87
ACTN1-218ENST00000556343 PSTPIP1O43586 416 aa9.63□□□□□ -0.87
ACTN1-218ENST00000556343 PRPSAP2O60256 369 aa9.63□□□□□ -0.87
ACTN1-218ENST00000556343 ZMYND10O75800 440 aa9.63□□□□□ -0.87
ACTN1-218ENST00000556343 GABBR2O75899 941 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms