RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 ZNF806P0C7X5 589 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 SRGAP2CP0DJJ0 459 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 CHMLP26374 656 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 GNA11P29992 359 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 AXLP30530 894 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 BUD31P41223 144 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 FNTBP49356 437 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 SCNN1GP51170 649 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 MLLT6P55198 1093 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 UGCGQ16739 394 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 AASDHQ4L235 1098 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 PABPC1LQ4VXU2 614 aaKnown RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 STPG1Q5TH74 334 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 TANGO2Q6ICL3 276 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 PDXDC1Q6P996 788 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 POMZP3Q6PJE2 187 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 PRSS55Q6UWB4 352 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 LRSAM1Q6UWE0 723 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 CEP68Q76N32 757 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 MIER3Q7Z3K6 550 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 HACE1Q8IYU2 909 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 SPEM1Q8N4L4 309 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 BVESQ8NE79 360 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 EXOC6Q8TAG9 804 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 LNX1Q8TBB1 728 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 CCDC12Q8WUD4 166 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 PRPF31Q8WWY3 499 aaKnown RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 FAM3CQ92520 227 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 SLC5A5Q92911 643 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 BRF1Q92994 677 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 PPP1R14AQ96A00 147 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 LENG9Q96B70 501 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 CCDC51Q96ER9 411 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 MCRS1Q96EZ8 462 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 LOXL4Q96JB6 756 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 CLSTN3Q9BQT9 956 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 TTPALQ9BTX7 342 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 TRMT61BQ9BVS5 477 aaKnown RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 LSM14BQ9BX40 385 aaKnown RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 PLA2G2FQ9BZM2 168 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 ZMYND12Q9H0C1 365 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 BRD9Q9H8M2 597 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 TRPV5Q9NQA5 729 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 NDRG2Q9UN36 371 aaKnown RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 IPPQ9Y573 584 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 COL4A3BPQ9Y5P4 624 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 RBM8AQ9Y5S9 174 aaKnown RBP5.35□□□□□ -1.55
ATXN3-239ENST00000556315 ATRXP46100 2492 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 CACNA1IQ9P0X4 2223 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 SF3B1O75533 1304 aaKnown RBP eCLIP5.34□□□□□ -1.554e-12■■■■■ 275.7
ATXN3-239ENST00000556315 TMEM150BA6NC51 233 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 SGSM2O43147 1006 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 DKC1O60832 514 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 PSMD10O75832 226 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 PAPSS2O95340 614 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 CHRNB1P11230 501 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 PTPN2P17706 415 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 ENDOUP21128 410 aaKnown RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 HOXA6P31267 233 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 MLH1P40692 756 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 PCBP3P57721 371 aaKnown RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 PSMC5P62195 406 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 SATB1Q01826 763 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 SPIRE1Q08AE8 756 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 LAMTOR4Q0VGL1 99 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 ELAVL2Q12926 359 aaKnown RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 LRRC32Q14392 662 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 HSP90AA2PQ14568 343 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 PSMD5Q16401 504 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 PFKFB3Q16875 520 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 SLC10A6Q3KNW5 377 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 RTP2Q5QGT7 225 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 FAM171A1Q5VUB5 890 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 LRCH2Q5VUJ6 765 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 NOTUMQ6P988 496 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 C1orf228Q6PIY5 440 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 ANO5Q75V66 913 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 CEP57Q86XR8 500 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 ARHGEF39Q8N4T4 335 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 GSTCDQ8NEC7 633 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 ADCY4Q8NFM4 1077 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 SLC7A14Q8TBB6 771 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 BICD2Q8TD16 824 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 TCP11Q8WWU5 503 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 PSPC1Q8WXF1 523 aaKnown RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 TCTN2Q96GX1 697 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 SGSM3Q96HU1 749 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 CCDC136Q96JN2 1154 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 SH2D3AQ9BRG2 576 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 EIF2AQ9BY44 585 aaKnown RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 TRIM6Q9C030 488 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 CSRNP2Q9H175 543 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 ARRDC1-AS1Q9H2J1 176 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 NOL6Q9H6R4 1146 aaKnown RBP5.34□□□□□ -1.55
ATXN3-239ENST00000556315 MINDY3Q9H8M7 445 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 ZFP14Q9HCL3 533 aa5.34□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF334Q9HCZ1 680 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms