RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	FASTKD1	Q53R41	847 aa	Known RBP	12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	UBA3	Q8TBC4	463 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	SMG5	Q9UPR3	1016 aa	Known RBP	12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	LIAS	O43766	372 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	DGKI	O75912	1065 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	ITGB3	P05106	788 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	TAC1	P20366	129 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	RFC5	P40937	340 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	CACNB2	Q08289	660 aa	Predicted RBP	12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	NME3	Q13232	169 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	METTL7B	Q6UX53	244 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	SPOCD1	Q6ZMY3	1216 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	ZNF606	Q8WXB4	792 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	ZBTB10	Q96DT7	871 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	TMEM121	Q9BTD3	319 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	SUN2	Q9UH99	717 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	ACTL7B	Q9Y614	415 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	SIPA1L1	O43166	1804 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	TPST1	O60507	370 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	TCEA3	O75764	348 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	C4BPA	P04003	597 aa	Known RBP	12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	GNL1	P36915	607 aa	Predicted RBP	12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	ADCYAP1R1	P41586	468 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	TNFAIP2	Q03169	654 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	RIPK1	Q13546	671 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	SMTNL2	Q2TAL5	461 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	PID1	Q7Z2X4	250 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	XPNPEP1	Q9NQW7	623 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	SETD4	Q9NVD3	440 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029	SENP1	Q9P0U3	644 aa		12.76	□□□□□ -0.37
TMPO-212	ENST00000556029		A8MUI8	341 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	ADORA2A	P29274	412 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	AP1B1	Q10567	949 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	HIF1A	Q16665	826 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	TAF1B	Q53T94	588 aa	Predicted RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	PRAMEF19	Q5SWL8	479 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	LAYN	Q6UX15	382 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	SCN4B	Q8IWT1	228 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	SYT17	Q9BSW7	474 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	HAUS8	Q9BT25	410 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	CACYBP	Q9HB71	228 aa	Known RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	HACD3	Q9P035	362 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029		F8VP50	259 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	HUS1	O60921	280 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	ATP5H	O75947	161 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	ZCCHC18	P0CG32	403 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	SRGAP2B	P0DMP2	458 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	XPA	P23025	273 aa	Predicted RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	TARS	P26639	723 aa	Known RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	SERPINB4	P48594	390 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	AP2B1	P63010	937 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	UBE3A	Q05086	875 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	TRIP10	Q15642	601 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	GPAT2	Q6NUI2	795 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	PHF13	Q86YI8	300 aa	Predicted RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	RFWD2	Q8NHY2	731 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	SLITRK1	Q96PX8	696 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	CGRRF1	Q99675	332 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029		V9GYQ6	96 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	UMODL1	Q5DID0	1318 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	PFDN6	O15212	129 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	ABHD2	P08910	425 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	FOXN2	P32314	431 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	MYL6	P60660	151 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	KLF1	Q13351	362 aa	Predicted RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	TFDP2	Q14188	446 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	ZNF268	Q14587	947 aa	Predicted RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	RNF43	Q68DV7	783 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	PLEKHA7	Q6IQ23	1121 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	TMEM154	Q6P9G4	183 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	BEST2	Q8NFU1	509 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	RNF139	Q8WU17	664 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	C7orf43	Q8WVR3	580 aa		12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	APOBEC3G	Q9HC16	384 aa	Known RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	DDX56	Q9NY93	547 aa	Known RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.75	□□□□□ -0.37
TMPO-212	ENST00000556029	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.74	□□□□□ -0.37
TMPO-212	ENST00000556029		B2RBV5	119 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	AIM2	O14862	343 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	RAP1GAP	P47736	663 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	LAMTOR4	Q0VGL1	99 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	TMEM132D	Q14C87	1099 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	ISLR2	Q6UXK2	745 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	ARMCX2	Q7L311	632 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	TRABD2A	Q86V40	505 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	ECHDC2	Q86YB7	292 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	CCDC33	Q8N5R6	958 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	OR5B17	Q8NGF7	314 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	TMA16	Q96EY4	203 aa	Known RBP	12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	CEP19	Q96LK0	163 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	MYLK2	Q9H1R3	596 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	RAB6B	Q9NRW1	208 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	ARHGAP28	Q9P2N2	729 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	HAO1	Q9UJM8	370 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029		H3BRB1	525 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	NPTXR	O95502	500 aa		12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	OAS1	P00973	400 aa	Known RBP	12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	S100B	P04271	92 aa	Predicted RBP	12.74	□□□□□ -0.37
TMPO-212	ENST00000556029	CXCL8	P10145	99 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms