RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 COG5Q9UP83 839 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 SCML2Q9UQR0 700 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 INSL5Q9Y5Q6 135 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 USP3Q9Y6I4 520 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 ATG2AQ2TAZ0 1938 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 GREB1Q4ZG55 1949 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 TMEM265A0A087WTH1 108 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 TMEM191CA6NGB0 347 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 SLC38A8A6NNN8 435 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 HSF2BPO75031 334 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 LRG1P02750 347 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 C8AP07357 584 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 CSH1P0DML2 217 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 CSH2P0DML3 217 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 DAOAP59103 153 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 YWHAZP63104 245 aaKnown RBP11.57□□□□□ -0.56
TMEM260-208ENST00000555905 ZNF569Q5MCW4 686 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 PPM1LQ5SGD2 360 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 ARCQ7LC44 396 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 DAAM2Q86T65 1068 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 SYCE1Q8N0S2 351 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 ELMOD1Q8N336 334 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 TRIM58Q8NG06 486 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 TPCN2Q8NHX9 752 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 CLEC4CQ8WTT0 213 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 HDAC7Q8WUI4 952 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 FAM149B1Q96BN6 582 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 IL37Q9NZH6 218 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 IP6K2Q9UHH9 426 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 BOLA1Q9Y3E2 137 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 ASB3Q9Y575 518 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 CHD7Q9P2D1 2997 aa11.57□□□□□ -0.56
TMEM260-208ENST00000555905 ZNF638Q14966 1978 aaKnown RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 TMEM110-MUSTN1A8MSY1 372 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 KIF2AO00139 706 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 RFXAPO00287 272 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 CAPN9O14815 690 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 PER2O15055 1255 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 ZNF500O60304 480 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 DAB1O75553 588 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 PALMO75781 387 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 GRAP2O75791 330 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 GJB6O95452 261 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 LTFP02788 710 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 TUBB4AP04350 444 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 GPD1P21695 349 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 RFC1P35251 1148 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 GNG11P61952 73 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 RPL7AP62424 266 aaKnown RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 PIGHQ14442 188 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 MESDQ14696 234 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 TAF5Q15542 800 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 PRPF38BQ5VTL8 546 aaKnown RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 C11orf63Q6NUN7 778 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 RBM23Q86U06 439 aaKnown RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 MON1AQ86VX9 555 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 STKLD1Q8NE28 680 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 FNIP1Q8TF40 1166 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 SLC22A17Q8WUG5 538 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 NDRG1Q92597 394 aaKnown RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 FBXO32Q969P5 355 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 PIWIL1Q96J94 861 aaKnown RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 C16orf45Q96MC5 204 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 SLITRK1Q96PX8 696 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 CDCA3Q99618 268 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 TTLL2Q9BWV7 592 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 POPDC2Q9HBU9 364 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 MAN1C1Q9NR34 630 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 UXTQ9UBK9 157 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 TMEM59LQ9UK28 342 aa11.56□□□□□ -0.56
TMEM260-208ENST00000555905 MAGED2Q9UNF1 606 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-208ENST00000555905 FAM92AA1XBS5 289 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 GRID2IPA4D2P6 1211 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 C2CD4BA6NLJ0 364 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 YJEFN3A6XGL0 299 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 E7ENQ6 273 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 BUB1BO60566 1050 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-208ENST00000555905 PROSCO94903 275 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 PDGFRAP16234 1089 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 EPCAMP16422 314 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 PSMA2P25787 234 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 SDC4P31431 198 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 NRIP1P48552 1158 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 ZNF143P52747 638 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-208ENST00000555905 YWHAGP61981 247 aaKnown RBP eCLIP11.55□□□□□ -0.56
TMEM260-208ENST00000555905 USP46P62068 366 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 TAF10Q12962 218 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 MTMR3Q13615 1198 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 DUSP6Q16828 381 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 BSPRYQ5W0U4 402 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 BTBD8Q5XKL5 378 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 NYAP1Q6ZVC0 841 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 DNAJB7Q7Z6W7 309 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-208ENST00000555905 ADGRD2Q7Z7M1 963 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 EMC1Q8N766 993 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 PDZD8Q8NEN9 1154 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 JOSD2Q8TAC2 188 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms