RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 AAASQ9NRG9 546 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 HDAC6Q9UBN7 1215 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 PUF60Q9UHX1 559 aaKnown RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 SORCS3Q9UPU3 1222 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 PCDHB4Q9Y5E5 795 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 CAPN6Q9Y6Q1 641 aa7.24□□□□□ -1.25
SLIRP-204ENST00000555890 V9GYY5 206 aaPredicted RBP7.24□□□□□ -1.25
SLIRP-204ENST00000555890 SCN10AQ9Y5Y9 1956 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 C17orf102A2RUQ5 167 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 TMCO5BA8MYB1 307 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 HAS3O00219 553 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 EREGO14944 169 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 ATXN7O15265 892 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 B4GALT5O43286 388 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 FAM189A1O60320 539 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 CABYRO75952 493 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 KCNK5O95279 499 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 VNN1O95497 513 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 FTLP02792 175 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 VTNP04004 478 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 IQCF3P0C7M6 154 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 STAG3L1P0CL83 205 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 CYP11B1P15538 503 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 TIMP2P16035 220 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 HSD3B2P26439 372 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 AXLP30530 894 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 OSTNP61366 133 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 WDR5P61964 334 aaKnown RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 NOP14P78316 857 aaKnown RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 SERINC3Q13530 473 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 TCEAL1Q15170 157 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 RPS6KA1Q15418 735 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 FSCN1Q16658 493 aaKnown RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 DCAF4L1Q3SXM0 396 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 TAF3Q5VWG9 929 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 TRIM72Q6ZMU5 477 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 SLC47A2Q86VL8 602 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 JAZF1Q86VZ6 243 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 RELL1Q8IUW5 271 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 NME8Q8N427 588 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 MEIOBQ8N635 442 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 C7orf31Q8N865 590 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 OR5B17Q8NGF7 314 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 SLC20A1Q8WUM9 679 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 KAT2BQ92831 832 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 ZBTB10Q96DT7 871 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 TRIM11Q96F44 468 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 FAXDC2Q96IV6 333 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 PBKQ96KB5 322 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 SPACA7Q96KW9 195 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 OSBPL9Q96SU4 736 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 C17orf80Q9BSJ5 609 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 SELENOOQ9BVL4 669 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 CCDC94Q9BW85 323 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 SCNM1Q9BWG6 230 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 SEZ6LQ9BYH1 1024 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 FAM49AQ9H0Q0 323 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 ISCUQ9H1K1 167 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 CHRDQ9H2X0 955 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 PDZD7Q9H5P4 517 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 ASB7Q9H672 318 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 ABI2Q9NYB9 513 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 SALL4Q9UJQ4 1053 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 NOCTQ9UK39 431 aaKnown RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 STRIP2Q9ULQ0 834 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 SMG5Q9UPR3 1016 aaKnown RBP7.23□□□□□ -1.25
SLIRP-204ENST00000555890 PCDHB2Q9Y5E7 798 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 NCANO14594 1321 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 PTPRJQ12913 1337 aa7.23□□□□□ -1.25
SLIRP-204ENST00000555890 LRRK2Q5S007 2527 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 A0A1B0GUA9 196 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 MBLAC1A4D2B0 266 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-204ENST00000555890 GRID2IPA4D2P6 1211 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 CES2O00748 559 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 TSPAN1O60635 241 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 SRGAP2O75044 1071 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 XYLBO75191 536 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 FTCDO95954 541 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ASS1P00966 412 aaKnown RBP7.22□□□□□ -1.25
SLIRP-204ENST00000555890 RPLP2P05387 115 aaKnown RBP7.22□□□□□ -1.25
SLIRP-204ENST00000555890 MMEP08473 750 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 P4HA1P13674 534 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 CHRNB2P17787 502 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ARF4P18085 180 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ABCB4P21439 1286 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 MCM3P25205 808 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ATICP31939 592 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 RFC2P35250 354 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 HADHBP55084 474 aaKnown RBP7.22□□□□□ -1.25
SLIRP-204ENST00000555890 MYL6P60660 151 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 FMO1Q01740 532 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ITIH3Q06033 890 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 SPEM2Q0P670 501 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 KIZQ2M2Z5 673 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ZNF699Q32M78 642 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 CFAP221Q4G0U5 840 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ARSJQ5FYB0 599 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-204ENST00000555890 ACAD10Q6JQN1 1059 aa7.22□□□□□ -1.25
SLIRP-204ENST00000555890 CATSPER4Q7RTX7 472 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms