RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 MYCBPAPQ8TBZ2 947 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 KCNV2Q8TDN2 545 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 SLC39A7Q92504 469 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 CALML4Q96GE6 196 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 ZFRQ96KR1 1074 aaKnown RBP8.92□□□□□ -0.98
NEK9-206ENST00000555537 MRGPRX1Q96LB2 322 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 MRPL45Q9BRJ2 306 aaKnown RBP8.92□□□□□ -0.98
NEK9-206ENST00000555537 GPR174Q9BXC1 333 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 PCIF1Q9H4Z3 704 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 SPHK2Q9NRA0 654 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 TM7SF3Q9NS93 570 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 RBAKQ9NYW8 714 aaPredicted RBP8.92□□□□□ -0.98
NEK9-206ENST00000555537 TBC1D14Q9P2M4 693 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 CDH9Q9ULB4 789 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 BTBD3Q9Y2F9 522 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 FNDC3AQ9Y2H6 1198 aaKnown RBP8.92□□□□□ -0.98
NEK9-206ENST00000555537 SH3BP1Q9Y3L3 701 aa8.92□□□□□ -0.98
NEK9-206ENST00000555537 SETXQ7Z333 2677 aaKnown RBP8.91□□□□□ -0.98
NEK9-206ENST00000555537 PTPRJQ12913 1337 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 A0A1B0GTW7 788 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 E2F8A0AVK6 867 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 CLDN5O00501 218 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 KCNK3O14649 394 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 TRIM66O15016 1216 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 CILPO75339 1184 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 SCP2P22307 547 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 UBA7P41226 1012 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 PGFP49763 221 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 NOP14P78316 857 aaKnown RBP8.91□□□□□ -0.98
NEK9-206ENST00000555537 HMGN5P82970 282 aaKnown RBP8.91□□□□□ -0.98
NEK9-206ENST00000555537 CAMK2BQ13554 666 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 POSTNQ15063 836 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 HLA-BQ31612 363 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 WDR45BQ5MNZ6 344 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 TPGS1Q6ZTW0 290 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 LIMS2Q7Z4I7 341 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 BRSK2Q8IWQ3 736 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 KIAA1958Q8N8K9 716 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 OR5B17Q8NGF7 314 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 SCAMP5Q8TAC9 235 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 RAD54LQ92698 747 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 TOE1Q96GM8 510 aaKnown RBP8.91□□□□□ -0.98
NEK9-206ENST00000555537 HPDLQ96IR7 371 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 C8orf48Q96LL4 319 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 SLITRK1Q96PX8 696 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 KCNK16Q96T55 309 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 MMS19Q96T76 1030 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 DPEP3Q9H4B8 488 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 ST6GALNAC4Q9H4F1 302 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 CCSER2Q9H7U1 834 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 DNAJC17Q9NVM6 304 aaKnown RBP8.91□□□□□ -0.98
NEK9-206ENST00000555537 SUSD2Q9UGT4 822 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 ITGA11Q9UKX5 1188 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.91□□□□□ -0.98
NEK9-206ENST00000555537 STARD13Q9Y3M8 1113 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 RAI2Q9Y5P3 530 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 IGSF10Q6WRI0 2623 aa8.91□□□□□ -0.98
NEK9-206ENST00000555537 SHROOM3Q8TF72 1996 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 A0A087WV48 116 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 A0A1B0GVT2 93 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 MEI4A8MW99 385 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 KCNJ18B7U540 433 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 NEDD8-MDP1E9PL57 170 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 HOXC11O43248 304 aaPredicted RBP8.9□□□□□ -0.98
NEK9-206ENST00000555537 PPP1R37O75864 691 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 DKK1O94907 266 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 TMEM191BP0C7N4 346 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 NCAM1P13591 858 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 PLA2G2AP14555 144 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 PTPN1P18031 435 aaKnown RBP8.9□□□□□ -0.98
NEK9-206ENST00000555537 WARSP23381 471 aaKnown RBP8.9□□□□□ -0.98
NEK9-206ENST00000555537 YWHAQP27348 245 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 CD6P30203 668 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 GNL1P36915 607 aaPredicted RBP8.9□□□□□ -0.98
NEK9-206ENST00000555537 MATKP42679 507 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 PPP3CCP48454 512 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 CASP5P51878 434 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 CLDN6P56747 220 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 RILPL1Q5EBL4 403 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 HECTD3Q5T447 861 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 DCAF12L1Q5VU92 463 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 GRAMD4Q6IC98 578 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 NUDT18Q6ZVK8 323 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 DPH6Q7L8W6 267 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 DDX42Q86XP3 938 aaKnown RBP eCLIP8.9□□□□□ -0.98
NEK9-206ENST00000555537 SCUBE3Q8IX30 993 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 KRI1Q8N9T8 703 aaKnown RBP8.9□□□□□ -0.98
NEK9-206ENST00000555537 OR6B3Q8NGW1 331 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 RASSF8Q8NHQ8 419 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 BAHD1Q8TBE0 780 aaPredicted RBP8.9□□□□□ -0.98
NEK9-206ENST00000555537 DNASE2BQ8WZ79 361 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 FOXJ1Q92949 421 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 BHMTQ93088 406 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 FBXO32Q969P5 355 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 UBL7Q96S82 380 aaPredicted RBP8.9□□□□□ -0.98
NEK9-206ENST00000555537 GABRG3Q99928 467 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 CBWD1Q9BRT8 395 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 STRA6Q9BX79 667 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 B3GNT5Q9BYG0 378 aa8.9□□□□□ -0.98
NEK9-206ENST00000555537 FGFBP2Q9BYJ0 223 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms