RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	ARMC6	Q6NXE6	501 aa		5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	SLC44A2	Q8IWA5	706 aa	Predicted RBP	5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	COLGALT2	Q8IYK4	626 aa		5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	SCAMP5	Q8TAC9	235 aa		5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	FAM136A	Q96C01	138 aa		5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	RNF31	Q96EP0	1072 aa		5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	HIST1H2AA	Q96QV6	131 aa		5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	DDX23	Q9BUQ8	820 aa	Known RBP	5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	GALNT9	Q9HCQ5	603 aa		5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	AKIP1	Q9NQ31	210 aa		5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	INTS13	Q9NVM9	706 aa		5.05	□□□□□ -1.6
KTN1-222	ENST00000555506	REXO2	Q9Y3B8	237 aa	Known RBP	5.05	□□□□□ -1.6
KTN1-222	ENST00000555506		J3KTA2	159 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	DHH	O43323	396 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	SNX2	O60749	519 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	PEX11B	O96011	259 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	ADORA2A	P29274	412 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	EPHA3	P29320	983 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	NTSR1	P30989	418 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	MCM7	P33993	719 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	GATM	P50440	423 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	SCAP	Q12770	1279 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	EFR3A	Q14156	821 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	BEAN1	Q3B7T3	259 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	ANKRD45	Q5TZF3	282 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	FTSJ3	Q8IY81	847 aa	Known RBP	5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	ABRA	Q8N0Z2	381 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	ZNF276	Q8N554	614 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	OSCP1	Q8WVF1	389 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	ATRIP	Q8WXE1	791 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	THAP4	Q8WY91	577 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	ATG4A	Q8WYN0	398 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	ZBTB45	Q96K62	511 aa	Predicted RBP	5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	WDR24	Q96S15	920 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	PYM1	Q9BRP8	204 aa	Known RBP	5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	NUDT22	Q9BRQ3	303 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	INO80B	Q9C086	356 aa	Predicted RBP	5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	AMBRA1	Q9C0C7	1298 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	ZNF768	Q9H5H4	540 aa	Known RBP	5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	MAP3K2	Q9Y2U5	619 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	SNX14	Q9Y5W7	946 aa		5.04	□□□□□ -1.6
KTN1-222	ENST00000555506	COL15A1	P39059	1388 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506		B9A039	149 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	AGPS	O00116	658 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	CDKL5	O76039	1030 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	CKMT1A	P12532	417 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	KLRK1	P26718	216 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	RBL1	P28749	1068 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	REST	Q13127	1097 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	TBX2	Q13207	712 aa	Predicted RBP	5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	FHL2	Q14192	279 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	GRM4	Q14833	912 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	TRIM60	Q495X7	471 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	DEPDC1	Q5TB30	811 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	RINT1	Q6NUQ1	792 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	TTC30A	Q86WT1	665 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	C2CD5	Q86YS7	1000 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	NAXE	Q8NCW5	288 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	SLC25A43	Q8WUT9	341 aa	Predicted RBP	5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	NEU4	Q8WWR8	484 aa	Predicted RBP	5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	LARP4B	Q92615	738 aa	Known RBP	5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	RILPL2	Q969X0	211 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	C17orf80	Q9BSJ5	609 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	TPSD1	Q9BZJ3	242 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	UNKL	Q9H9P5	680 aa	Known RBP	5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	SEPSECS	Q9HD40	501 aa	Known RBP	5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	DAPP1	Q9UN19	280 aa		5.03	□□□□□ -1.6
KTN1-222	ENST00000555506	TRGV11	A0A075B6L2	103 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	PNMA6E	A0A0J9YXQ4	647 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	PRRT4	C9JH25	899 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	MAK	P20794	623 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	DDX6	P26196	483 aa	Known RBP eCLIP	5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	ZFP36	P26651	326 aa	Known RBP	5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	AKT1	P31749	480 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	DDIT3	P35638	169 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	PAPOLA	P51003	745 aa	Known RBP	5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	ATXN1	P54253	815 aa	Known RBP	5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	PRKAA2	P54646	552 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	HNRNPA0	Q13151	305 aa	Known RBP	5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	FHL3	Q13643	280 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	MAPRE1	Q15691	268 aa	Known RBP	5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	FAM110C	Q1W6H9	321 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	SLC4A8	Q2Y0W8	1093 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	INTS11	Q5TA45	600 aa	Known RBP	5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	NFRKB	Q6P4R8	1299 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	RAB11FIP2	Q7L804	512 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	ZNF627	Q7L945	461 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	LRRTM4	Q86VH4	590 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	HERC6	Q8IVU3	1022 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	IZUMO1	Q8IYV9	350 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	SUN3	Q8TAQ9	357 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	WDR60	Q8WVS4	1066 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	MPP4	Q96JB8	637 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	PPM1M	Q96MI6	270 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	VN1R3	Q9BXE9	311 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	ACTRT3	Q9BYD9	372 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	TAF1D	Q9H5J8	278 aa	Predicted RBP	5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	NRDE2	Q9H7Z3	1164 aa		5.02	□□□□□ -1.61
KTN1-222	ENST00000555506	FSCN3	Q9NQT6	498 aa		5.02	□□□□□ -1.61

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