RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 SNTG2Q9NY99 539 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 FETUBQ9UGM5 382 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 POLIQ9UNA4 740 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 LRRD1A4D1F6 860 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 C3orf70A6NLC5 250 aaPredicted RBP24.74■■□□□ 1.55
STRN3-207ENST00000555358 NDC80O14777 642 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 PEX11AO75192 247 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 LSM8O95777 96 aaKnown RBP24.74■■□□□ 1.55
STRN3-207ENST00000555358 IFNB1P01574 187 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 KRT4P19013 534 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 GNAZP19086 355 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 GRM5P41594 1212 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 EFTUD2Q15029 972 aaKnown RBP eCLIP24.74■■□□□ 1.552e-7■■■■□ 22.1
STRN3-207ENST00000555358 HIF1AQ16665 826 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 NIPA2Q8N8Q9 360 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 CXorf38Q8TB03 319 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 SPC25Q9HBM1 224 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 XPNPEP3Q9NQH7 507 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 NXF1Q9UBU9 619 aaKnown RBP24.74■■□□□ 1.55
STRN3-207ENST00000555358 GOLGA8SH3BPF8 625 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 GOLGA8MH3BSY2 632 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 KPNA6O60684 536 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 GNAT1P11488 350 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 GM2AP17900 193 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 ASPAP45381 313 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 SLC27A1Q6PCB7 646 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 DCUN1D2Q6PH85 259 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 ZNF276Q8N554 614 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 WDR83Q9BRX9 315 aaKnown RBP24.73■■□□□ 1.55
STRN3-207ENST00000555358 DHRS4Q9BTZ2 278 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 TBC1D10AQ9BXI6 508 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 RNPEPL1Q9HAU8 725 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 TRAFD1O14545 582 aaPredicted RBP24.73■■□□□ 1.55
STRN3-207ENST00000555358 ZWINTO95229 277 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 PAX7P23759 505 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 BRD2P25440 801 aaKnown RBP24.73■■□□□ 1.55
STRN3-207ENST00000555358 PIGHQ14442 188 aaPredicted RBP24.73■■□□□ 1.55
STRN3-207ENST00000555358 KYAT1Q16773 422 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 DCAF4L1Q3SXM0 396 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 MSS51Q4VC12 460 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 ZNF394Q53GI3 561 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 ANKRD22Q5VYY1 191 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 GDF6Q6KF10 455 aaPredicted RBP24.73■■□□□ 1.55
STRN3-207ENST00000555358 NOTUMQ6P988 496 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 WDTC1Q8N5D0 677 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 MZB1Q8WU39 189 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 FAXDC2Q96IV6 333 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 PHACTR1Q9C0D0 580 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 CISHQ9NSE2 258 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 GTF2IRD1Q9UHL9 959 aa24.73■■□□□ 1.55
STRN3-207ENST00000555358 CBX6O95503 412 aa24.72■■□□□ 1.55
STRN3-207ENST00000555358 APLP1P51693 650 aa24.72■■□□□ 1.55
STRN3-207ENST00000555358 PLCB3Q01970 1234 aa24.72■■□□□ 1.55
STRN3-207ENST00000555358 TMEM132DQ14C87 1099 aa24.72■■□□□ 1.55
STRN3-207ENST00000555358 SLC45A4Q5BKX6 768 aa24.72■■□□□ 1.55
STRN3-207ENST00000555358 ZC3H12AQ5D1E8 599 aaKnown RBP24.72■■□□□ 1.55
STRN3-207ENST00000555358 SRRDQ9UH36 339 aa24.72■■□□□ 1.55
STRN3-207ENST00000555358 ZMYND8Q9ULU4 1186 aaPredicted RBP24.72■■□□□ 1.55
STRN3-207ENST00000555358 PIN4Q9Y237 131 aaKnown RBP24.72■■□□□ 1.55
STRN3-207ENST00000555358 C2CD2LO14523 706 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 SSTR1P30872 391 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 RAP1GAPP47736 663 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 CTCFP49711 727 aaPredicted RBP24.71■■□□□ 1.55
STRN3-207ENST00000555358 GDF10P55107 478 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 FAM47CQ5HY64 1035 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 FNBP1LQ5T0N5 605 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 ZNF449Q6P9G9 518 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 ADGRD1Q6QNK2 874 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 PCGF5Q86SE9 256 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 KCNV2Q8TDN2 545 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 CPT1BQ92523 772 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 WNT8BQ93098 351 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 NXF3Q9H4D5 531 aaKnown RBP24.71■■□□□ 1.55
STRN3-207ENST00000555358 RNF19AQ9NV58 838 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 NUMBLQ9Y6R0 609 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 CALB2P22676 271 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 ADRA1DP25100 572 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 TAP1Q03518 808 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 RNASELQ05823 741 aaKnown RBP24.71■■□□□ 1.55
STRN3-207ENST00000555358 TAF1BQ53T94 588 aaPredicted RBP24.71■■□□□ 1.55
STRN3-207ENST00000555358 PLEKHG4Q58EX7 1191 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 NLRP9Q7RTR0 991 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 LONP2Q86WA8 852 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 PPIL6Q8IXY8 311 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 REM2Q8IYK8 340 aaPredicted RBP24.71■■□□□ 1.55
STRN3-207ENST00000555358 NAT8LQ8N9F0 302 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 TMEM35BQ8NCS4 154 aa24.71■■□□□ 1.55
STRN3-207ENST00000555358 SAE1Q9UBE0 346 aaPredicted RBP24.71■■□□□ 1.55
STRN3-207ENST00000555358 ASGR1P07306 291 aa24.7■■□□□ 1.55
STRN3-207ENST00000555358 EPHB2P29323 1055 aa24.7■■□□□ 1.55
STRN3-207ENST00000555358 POLR2BP30876 1174 aaKnown RBP24.7■■□□□ 1.55
STRN3-207ENST00000555358 CRYBB1P53674 252 aaPredicted RBP24.7■■□□□ 1.55
STRN3-207ENST00000555358 HTRA3P83110 453 aa24.7■■□□□ 1.55
STRN3-207ENST00000555358 POLNQ7Z5Q5 900 aa24.7■■□□□ 1.55
STRN3-207ENST00000555358 ANKRD27Q96NW4 1050 aa24.7■■□□□ 1.55
STRN3-207ENST00000555358 C10orf88Q9H8K7 445 aa24.7■■□□□ 1.55
STRN3-207ENST00000555358 KANSL3Q9P2N6 904 aa24.7■■□□□ 1.55
STRN3-207ENST00000555358 RALGAPA2Q2PPJ7 1873 aa24.7■■□□□ 1.54
STRN3-207ENST00000555358 CDH5P33151 784 aaPredicted RBP24.7■■□□□ 1.54
STRN3-207ENST00000555358 KCNA10Q16322 511 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms