RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 TJP2Q9UDY2 1190 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 PCDHA13Q9Y5I0 950 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 COL4A4P53420 1690 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 EYSQ5T1H1 3165 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 TRANK1O15050 2925 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 TCRBV5S1A1TA0A578 114 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 ZNF840PA6NDX5 716 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 SIGLEC16A6NMB1 481 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 YJEFN3A6XGL0 299 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 E7ENQ6 273 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 TBX10O75333 385 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 IPO7O95373 1038 aaKnown RBP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 CYP1A2P05177 515 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 RRM1P23921 792 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 CDC25CP30307 473 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 YWHAGP61981 247 aaKnown RBP eCLIP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 IFRD2Q12894 506 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 MAMLD1Q13495 774 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 BSPRYQ5W0U4 402 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 PLEKHA7Q6IQ23 1121 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 OLFML1Q6UWY5 402 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 TOGARAM2Q6ZUX3 1019 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 FAM183BPQ6ZVS7 135 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 GAREM2Q75VX8 874 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 PDZD4Q76G19 769 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 BHLHA9Q7RTU4 235 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 DNAAF5Q86Y56 855 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 FEZF2Q8TBJ5 459 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 CLEC4CQ8WTT0 213 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 PPM1EQ8WY54 764 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 GOLGA1Q92805 767 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 HLA-CQ95604 372 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 RIPOR3Q96MK2 946 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 ZNF830Q96NB3 372 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 TRIM62Q9BVG3 475 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 THAP2Q9H0W7 228 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 ZNF334Q9HCZ1 680 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 WDR6Q9NNW5 1121 aaKnown RBP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 LUC7LQ9NQ29 371 aaKnown RBP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 ABCC13Q9NSE7 274 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 PARVAQ9NVD7 372 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 CNOT8Q9UFF9 292 aaKnown RBP10.7□□□□□ -0.7
SYNE2-215ENST00000554997 CD207Q9UJ71 328 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 TMEM59LQ9UK28 342 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 COG5Q9UP83 839 aa10.7□□□□□ -0.7
SYNE2-215ENST00000554997 A0A1W2PQH9 124 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 FAM170AA1A519 330 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 HSF2BPO75031 334 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 LTFP02788 710 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 FYNP06241 537 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 TMEM253P0C7T8 217 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 KRT3P12035 628 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 MYL4P12829 197 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 PFKLP17858 780 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 ABCB4P21439 1286 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 GABRR2P28476 465 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 CCR2P41597 374 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 MTHFRP42898 656 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 PGFP49763 221 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 TCEAL1Q15170 157 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 SKIV2LQ15477 1246 aaKnown RBP10.69□□□□□ -0.7
SYNE2-215ENST00000554997 TAF5Q15542 800 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 PRSS36Q5K4E3 855 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 PPP1R15BQ5SWA1 713 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 BTBD8Q5XKL5 378 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 SLC26A9Q7LBE3 791 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 PHLDB2Q86SQ0 1253 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 SMRP1Q8NCR6 262 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 C3orf20Q8ND61 904 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 CTNNBL1Q8WYA6 563 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-215ENST00000554997 NECTIN4Q96NY8 510 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 APOL5Q9BWW9 433 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 ATXN3LQ9H3M9 355 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 UBE2ZQ9H832 354 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-215ENST00000554997 NMUR1Q9HB89 426 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 POPDC2Q9HBU9 364 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 MRPL47Q9HD33 250 aaKnown RBP10.69□□□□□ -0.7
SYNE2-215ENST00000554997 OSER1Q9NX31 292 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 GMIPQ9P107 970 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 ZMYM5Q9UJ78 669 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 ADGRG1Q9Y653 693 aa10.69□□□□□ -0.7
SYNE2-215ENST00000554997 A0A1W2PRU2 124 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 TMEM191CA6NGB0 347 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 GOLGA8SH3BPF8 625 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 MOSPD3O75425 235 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 ABL1P00519 1130 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 RALAP11233 206 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 NCAM1P13591 858 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 RARGP13631 454 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 FSHRP23945 695 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 DDX6P26196 483 aaKnown RBP eCLIP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 MATKP42679 507 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 TUBP50607 506 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 RNASE9P60153 205 aaKnown RBP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 NTHL1P78549 312 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 SLC5A9Q2M3M2 681 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 HECTD3Q5T447 861 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 FAM102AQ5T9C2 384 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 KLHDC10Q6PID8 442 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 HFE2Q6ZVN8 426 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms