RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 SLC7A9P82251 487 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 ADIGQ0VDE8 80 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 ZNF268Q14587 947 aaPredicted RBP13.01□□□□□ -0.33
SYNE2-214ENST00000554928 HECTD3Q5T447 861 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 NAIF1Q69YI7 327 aaPredicted RBP13.01□□□□□ -0.33
SYNE2-214ENST00000554928 CCDC186Q7Z3E2 898 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 BMP8AQ7Z5Y6 402 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 SLC47A2Q86VL8 602 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 FAM71AQ8IYT1 594 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 TMEM105Q8N8V8 129 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 PDZD8Q8NEN9 1154 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 FLCNQ8NFG4 579 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 CLEC4CQ8WTT0 213 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 ZNF606Q8WXB4 792 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 OVCA2Q8WZ82 227 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 CHFRQ96EP1 664 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 NAP1L5Q96NT1 182 aaPredicted RBP13.01□□□□□ -0.33
SYNE2-214ENST00000554928 UBXN6Q9BZV1 441 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 DNAI2Q9GZS0 605 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 NAT10Q9H0A0 1025 aaKnown RBP13.01□□□□□ -0.33
SYNE2-214ENST00000554928 LINC00597Q9H2U6 94 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 FBXO44Q9H4M3 255 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 TBC1D17Q9HA65 648 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 GKN1Q9NS71 199 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 OBP2AQ9NY56 170 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 GTSE1Q9NYZ3 720 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 EHD2Q9NZN4 543 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 METRNQ9UJH8 293 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 ARHGAP26Q9UNA1 814 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 MTF2Q9Y483 593 aaPredicted RBP13.01□□□□□ -0.33
SYNE2-214ENST00000554928 WNT6Q9Y6F9 365 aa13.01□□□□□ -0.33
SYNE2-214ENST00000554928 MYH10P35580 1976 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 SOBPA7XYQ1 873 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 CHADO15335 359 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 TLR5O60602 858 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 SETSIPP0DME0 302 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 LCP1P13796 627 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 PPP3CCP48454 512 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 POLR2FP61218 127 aaKnown RBP13□□□□□ -0.33
SYNE2-214ENST00000554928 UBXN1Q04323 297 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 MTF1Q14872 753 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 MLF2Q15773 248 aaPredicted RBP13□□□□□ -0.33
SYNE2-214ENST00000554928 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
SYNE2-214ENST00000554928 TPRG1Q6ZUI0 275 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 PASD1Q8IV76 773 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 YAF2Q8IY57 180 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 FBXL6Q8N531 539 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 WDTC1Q8N5D0 677 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 E2F7Q96AV8 911 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 FAM83CQ9BQN1 747 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 EBF3Q9H4W6 596 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 NLRC4Q9NPP4 1024 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 PLCB1Q9NQ66 1216 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13□□□□□ -0.33
SYNE2-214ENST00000554928 NAGPAQ9UK23 515 aa13□□□□□ -0.33
SYNE2-214ENST00000554928 YJEFN3A6XGL0 299 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 SMTNL1A8MU46 457 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 E7ENQ6 273 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 F8VZ95 297 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 IRF1P10914 325 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 RARGP13631 454 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 FKBP15Q5T1M5 1219 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 TXNDC11Q6PKC3 985 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 KCTD13Q8WZ19 329 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 DNASE1L2Q92874 299 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 IRF7Q92985 503 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 ERGIC2Q96RQ1 377 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 DDX23Q9BUQ8 820 aaKnown RBP12.99□□□□□ -0.33
SYNE2-214ENST00000554928 KIF9Q9HAQ2 790 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 LRRC4Q9HBW1 653 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
SYNE2-214ENST00000554928 CYLDQ9NQC7 956 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 TLR8Q9NR97 1041 aaKnown RBP12.99□□□□□ -0.33
SYNE2-214ENST00000554928 CFAP97Q9P2B7 532 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 ZMYM5Q9UJ78 669 aa12.99□□□□□ -0.33
SYNE2-214ENST00000554928 KIF26AQ9ULI4 1882 aaPredicted RBP12.98□□□□□ -0.33
SYNE2-214ENST00000554928 MYO16Q9Y6X6 1858 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 ZDBF2Q9HCK1 2354 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 GREM1O60565 184 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 GFPT2O94808 682 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 ZBED1O96006 694 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 TPM2P07951 284 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 GLULP15104 373 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 TCF3P15923 654 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 TUBP50607 506 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 JAM2P57087 298 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 STARD6P59095 220 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 DAOAP59103 153 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 YWHAGP61981 247 aaKnown RBP eCLIP12.98□□□□□ -0.33
SYNE2-214ENST00000554928 PFKPQ01813 784 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 STILQ15468 1287 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 EML3Q32P44 896 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 ARHGAP29Q52LW3 1261 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 TAF3Q5VWG9 929 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 NOP9Q86U38 636 aaKnown RBP12.98□□□□□ -0.33
SYNE2-214ENST00000554928 ZNF687Q8N1G0 1237 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 C1orf131Q8NDD1 294 aaKnown RBP12.98□□□□□ -0.33
SYNE2-214ENST00000554928 ANKRD20A12PQ8NF67 263 aa12.98□□□□□ -0.33
SYNE2-214ENST00000554928 SLC20A1Q8WUM9 679 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms