RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 TOMM70O94826 608 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 FAM131BQ86XD5 332 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 PHF13Q86YI8 300 aaPredicted RBP17.26■□□□□ 0.35
PCNX1-209ENST00000554879 BBOF1Q8ND07 529 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 EPAS1Q99814 870 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 KRT82Q9NSB4 513 aa17.26■□□□□ 0.35
PCNX1-209ENST00000554879 ADGRA2Q96PE1 1338 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 CLDN5O00501 218 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 PSTPIP1O43586 416 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 PCSK1P29120 753 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 PMS2P54278 862 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 POU5F1BQ06416 359 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 CCDC92Q53HC0 331 aaPredicted RBP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 SLC4A11Q8NBS3 891 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 TMEM40Q8WWA1 233 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 B3GNT5Q9BYG0 378 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 ADAM33Q9BZ11 813 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 IQCGQ9H095 443 aaKnown RBP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 C10orf88Q9H8K7 445 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 ERVK-5Q9HDB9 667 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 EVPLQ92817 2033 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 CILPO75339 1184 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 BCAT1P54687 386 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 YWHAGP61981 247 aaKnown RBP eCLIP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 ELF3P78545 371 aaPredicted RBP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 P3H1Q32P28 736 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 ZNF449Q6P9G9 518 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 NAF1Q96HR8 494 aaKnown RBP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 CFAP57Q96MR6 1250 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 RNF186Q9NXI6 227 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 ABI2Q9NYB9 513 aaPredicted RBP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 USP18Q9UMW8 372 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 RTN3O95197 1032 aaPredicted RBP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 UNGP13051 313 aaPredicted RBP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 SLC7A14Q8TBB6 771 aa17.25■□□□□ 0.35
PCNX1-209ENST00000554879 EMID1Q96A84 441 aaPredicted RBP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.25■□□□□ 0.35
PCNX1-209ENST00000554879 ARHGEF37A1IGU5 675 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 DDX3YO15523 660 aaKnown RBP17.24■□□□□ 0.35
PCNX1-209ENST00000554879 HCRTO43612 131 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 AHCYL1O43865 530 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 MON1BQ7L1V2 547 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 SPATA2LQ8IUW3 424 aaPredicted RBP17.24■□□□□ 0.35
PCNX1-209ENST00000554879 SPATA18Q8TC71 538 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 SH3TC2Q8TF17 1288 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 ADIGQ0VDE8 80 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 RCN2Q14257 317 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 TTMPQ5BVD1 217 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 SNF8Q96H20 258 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 C9orf72Q96LT7 481 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 SYT15Q9BQS2 421 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 TRPV6Q9H1D0 765 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 RBP3P10745 1247 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 ITIH3Q06033 890 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 C15orf39Q6ZRI6 1047 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 TSEN2Q8NCE0 465 aaKnown RBP17.24■□□□□ 0.35
PCNX1-209ENST00000554879 SNX27Q96L92 541 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 DPEP3Q9H4B8 488 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 GNEQ9Y223 722 aaKnown RBP17.24■□□□□ 0.35
PCNX1-209ENST00000554879 BAG2O95816 211 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 NCAM1P13591 858 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 SMAD1Q15797 465 aaKnown RBP17.24■□□□□ 0.35
PCNX1-209ENST00000554879 MARCH8Q5T0T0 291 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 PRUNE1Q86TP1 453 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 TTC13Q8NBP0 860 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 ADAM32Q8TC27 787 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 TMEM121Q9BTD3 319 aa17.24■□□□□ 0.35
PCNX1-209ENST00000554879 MIPP30301 263 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 ZBTB16Q05516 673 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 BST2Q10589 180 aaKnown RBP17.23■□□□□ 0.35
PCNX1-209ENST00000554879 SPOCD1Q6ZMY3 1216 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 FAM228AQ86W67 206 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 PRELID2Q8N945 189 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 ZMAT2Q96NC0 199 aaKnown RBP17.23■□□□□ 0.35
PCNX1-209ENST00000554879 CNPY3Q9BT09 278 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 PHACTR1Q9C0D0 580 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 SENP6Q9GZR1 1112 aaPredicted RBP17.23■□□□□ 0.35
PCNX1-209ENST00000554879 MRPL42Q9Y6G3 142 aaKnown RBP17.23■□□□□ 0.35
PCNX1-209ENST00000554879 KIAA0100Q14667 2235 aaKnown RBP17.23■□□□□ 0.35
PCNX1-209ENST00000554879 DNM1LO00429 736 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 GRK4P32298 578 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 FAM187BQ17R55 369 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 CWF19L1Q69YN2 538 aaKnown RBP17.23■□□□□ 0.35
PCNX1-209ENST00000554879 FAM183BPQ6ZVS7 135 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 EXD1Q8NHP7 514 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 DDX1Q92499 740 aaKnown RBP17.23■□□□□ 0.35
PCNX1-209ENST00000554879 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 RBM47A0AV96 593 aaKnown RBP17.23■□□□□ 0.35
PCNX1-209ENST00000554879 CCT8L1PA6NM43 557 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 ERBB2P04626 1255 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 ODC1P11926 461 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 ZNF268Q14587 947 aaPredicted RBP17.23■□□□□ 0.35
PCNX1-209ENST00000554879 TFDP3Q5H9I0 405 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 FAF2Q96CS3 445 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 DEFB118Q96PH6 123 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 GORASP1Q9BQQ3 440 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 SDCBP2Q9H190 292 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 ETNK1Q9HBU6 452 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 ATP8B3O60423 1300 aa17.23■□□□□ 0.35
PCNX1-209ENST00000554879 O00370 1275 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms