RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 DTX3LQ8TDB6 740 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 INSM2Q96T92 566 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ELOVL4Q9GZR5 314 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 DNAI2Q9GZS0 605 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ACAD9Q9H845 621 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 POPDC3Q9HBV1 291 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 KRT82Q9NSB4 513 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 MTRF1LQ9UGC7 380 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 CDH7Q9ULB5 785 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 MTUS1Q9ULD2 1270 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 GNEQ9Y223 722 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ADAMTS20P59510 1910 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TCF20Q9UGU0 1960 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TMEM120BA0PK00 339 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ARHGEF35A5YM69 484 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 G3V2L1 256 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 AHCYL1O43865 530 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 CEP104O60308 925 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 DPM1O60762 260 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 C6orf222P0C671 652 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ACPPP15309 386 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 IL1RNP18510 177 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 HOXA11P31270 313 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ARRB2P32121 409 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 RPL22P35268 128 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 VASPP50552 380 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 COPAP53621 1224 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ACTR3P61158 418 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 CDC42EP1Q00587 391 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TIAL1Q01085 375 aaKnown RBP eCLIP3.6□□□□□ -1.837e-7■■□□□ 14.3
SEC23A-207ENST00000554615 TBL3Q12788 808 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TNFAIP1Q13829 316 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 DSC3Q14574 896 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 SNCBQ16143 134 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF423Q2M1K9 1284 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ACBD5Q5T8D3 534 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 OLFML2BQ68BL8 750 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 NUGGCQ68CJ6 796 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ANO7Q6IWH7 933 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 IRGCQ6NXR0 463 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 MTHFD1LQ6UB35 978 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 FKBP9P1Q75LS8 142 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 KBTBD6Q86V97 674 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 RNF168Q8IYW5 571 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 FAM13CQ8NE31 585 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 GPR150Q8NGU9 434 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 OR2W6PQ8NHA6 318 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ZFP28Q8NHY6 868 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 PIGOQ8TEQ8 1089 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 PDCD6IPQ8WUM4 868 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ISG20Q96AZ6 181 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TRERF1Q96PN7 1200 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 RNF157Q96PX1 679 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 BTBD9Q96Q07 612 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 NPY6RQ99463 290 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 GPATCH1Q9BRR8 931 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 CADM1Q9BY67 442 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 FAM192AQ9GZU8 254 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF696Q9H7X3 374 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 QTRT2Q9H974 415 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 VTA1Q9NP79 307 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ABCD2Q9UBJ2 740 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 MTO1Q9Y2Z2 717 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 CCDC9Q9Y3X0 531 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 A0A088AWK7 358 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 PRSS51A0A1B0GVH4 220 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TRIM24O15164 1050 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 CLIC2O15247 247 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 DCTN3O75935 186 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 UBOX5O94941 541 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 FBXO21O94952 628 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TJP3O95049 919 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 EGFRP00533 1210 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 PROCP04070 461 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 SERPINA6P08185 405 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 MYL3P08590 195 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 KRT7P08729 469 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 COL6A2P12110 1019 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 CREB1P16220 341 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 HADHAP40939 763 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 MSH2P43246 934 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 PXNP49023 591 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 DMP1Q13316 513 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 NEDD9Q14511 834 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 NAA25Q14CX7 972 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TNIP1Q15025 636 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 SMU1Q2TAY7 513 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 NCBP2-AS2Q69YL0 99 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 FAM171BQ6P995 826 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 EPGNQ6UW88 154 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 PAQR9Q6ZVX9 377 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 BZW1Q7L1Q6 419 aaKnown RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 RAB44Q7Z6P3 723 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 ADGRF2Q8IZF7 708 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 GPC2Q8N158 579 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 TTLL6Q8N841 843 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 C1orf127Q8N9H9 656 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 RBBP8NLQ8NC74 664 aaPredicted RBP3.6□□□□□ -1.83
SEC23A-207ENST00000554615 OR5B17Q8NGF7 314 aa3.6□□□□□ -1.83
SEC23A-207ENST00000554615 RSPH1Q8WYR4 309 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms