RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 GOLGA7BQ2TAP0 167 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 ZNF528Q3MIS6 628 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 ZC3H14Q6PJT7 736 aaKnown RBP13.77□□□□□ -0.21
SHMT2-211ENST00000554310 TMEM270Q6UE05 265 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 MAMSTRQ6ZN01 415 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 GVINP1Q7Z2Y8 2422 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 CCDC186Q7Z3E2 898 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 FAM114A1Q8IWE2 563 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 SYNPOQ8N3V7 929 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 UBXN6Q9BZV1 441 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 NACA2Q9H009 215 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 INTS2Q9H0H0 1204 aaKnown RBP13.77□□□□□ -0.21
SHMT2-211ENST00000554310 THAP9Q9H5L6 903 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 ECT2Q9H8V3 914 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 LMAN1LQ9HAT1 526 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 SMPD4Q9NXE4 827 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 CFAP97Q9P2B7 532 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 HESX1Q9UBX0 185 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 CHORDC1Q9UHD1 332 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-211ENST00000554310 TSPAN16Q9UKR8 245 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 KIAA1257Q9ULG3 409 aa13.77□□□□□ -0.21
SHMT2-211ENST00000554310 FAM186AA6NE01 2351 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 OTOL1A6NHN0 477 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-211ENST00000554310 O00370 1275 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 TRDMT1O14717 391 aaKnown RBP13.76□□□□□ -0.21
SHMT2-211ENST00000554310 SP9P0CG40 484 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 VDRP11473 427 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 GJA4P35212 333 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 CCR3P51677 355 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 BST2Q10589 180 aaKnown RBP13.76□□□□□ -0.21
SHMT2-211ENST00000554310 MTAPQ13126 283 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 NR1H3Q13133 447 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 TMEM196Q5HYL7 178 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 CT47A1Q5JQC4 288 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-211ENST00000554310 KLHDC10Q6PID8 442 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 PIGZQ86VD9 579 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 TTC30AQ86WT1 665 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 MAML2Q8IZL2 1156 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-211ENST00000554310 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 CHFRQ96EP1 664 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 ZFRQ96KR1 1074 aaKnown RBP13.76□□□□□ -0.21
SHMT2-211ENST00000554310 PHOX2BQ99453 314 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 TBC1D14Q9P2M4 693 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 USP3Q9Y6I4 520 aa13.76□□□□□ -0.21
SHMT2-211ENST00000554310 E2F8A0AVK6 867 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 GTPBP10A4D1E9 387 aaKnown RBP13.75□□□□□ -0.21
SHMT2-211ENST00000554310 XPO1O14980 1071 aaKnown RBP13.75□□□□□ -0.21
SHMT2-211ENST00000554310 SETSIPP0DME0 302 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 ZNF132P52740 706 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 GRSF1Q12849 480 aaKnown RBP eCLIP13.75□□□□□ -0.21
SHMT2-211ENST00000554310 PPP2R5DQ14738 602 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 STILQ15468 1287 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 RAB41Q5JT25 222 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 TADA2BQ86TJ2 420 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 IRF2BP1Q8IU81 584 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 ARHGEF19Q8IW93 802 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 ARHGAP18Q8N392 663 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 SPEM1Q8N4L4 309 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 RBBP8NLQ8NC74 664 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-211ENST00000554310 KAT5Q92993 513 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 OTUB2Q96DC9 234 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 FAM81BQ96LP2 452 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 CDK5RAP1Q96SZ6 601 aaKnown RBP13.75□□□□□ -0.21
SHMT2-211ENST00000554310 P2RY13Q9BPV8 354 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
SHMT2-211ENST00000554310 CLIC5Q9NZA1 410 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 PCDHB4Q9Y5E5 795 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 KIAA1549LQ6ZVL6 1849 aa13.75□□□□□ -0.21
SHMT2-211ENST00000554310 MYO15AQ9UKN7 3530 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 A0A1W2PQH9 124 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 ADH1CP00326 375 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 CYP17A1P05093 508 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 DRD1P21728 446 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 ATP5C1P36542 298 aaKnown RBP13.74□□□□□ -0.21
SHMT2-211ENST00000554310 MTIF2P46199 727 aaKnown RBP13.74□□□□□ -0.21
SHMT2-211ENST00000554310 PLA2G4AP47712 749 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 PGFP49763 221 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 PDE4CQ08493 712 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 GOLGA8FQ08AF8 430 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 GOLGA8DPQ0D2H9 430 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 STX1AQ16623 288 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 MAN2A1Q16706 1144 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 ANO6Q4KMQ2 910 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 SMYD5Q6GMV2 418 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 FSTL4Q6MZW2 842 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 TRIM65Q6PJ69 517 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 LCLAT1Q6UWP7 414 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 GBP6Q6ZN66 633 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 Q6ZS52 159 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 RRAGAQ7L523 313 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 ENOSF1Q7L5Y1 443 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 ALYREFQ86V81 257 aaKnown RBP13.74□□□□□ -0.21
SHMT2-211ENST00000554310 CREBRFQ8IUR6 639 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 ZNF276Q8N554 614 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 FAM126AQ9BYI3 521 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-211ENST00000554310 SEMA4AQ9H3S1 761 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 NMUR1Q9HB89 426 aa13.74□□□□□ -0.21
SHMT2-211ENST00000554310 RBM12Q9NTZ6 932 aaKnown RBP13.74□□□□□ -0.21
SHMT2-211ENST00000554310 OSER1Q9NX31 292 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms