RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 ZNF180Q9UJW8 692 aa9.42□□□□□ -0.9
AL049839.2-201ENST00000553947 TMEM221A6NGB7 291 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 LSM8O95777 96 aaKnown RBP9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 GH1P01241 217 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 CALB1P05937 261 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 STAG3L1P0CL83 205 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 BRAFP15056 766 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 CD19P15391 556 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ITIH2P19823 946 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 CDH5P33151 784 aaPredicted RBP9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 MAN1A1P33908 653 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ADCY8P40145 1251 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ADCYAP1R1P41586 468 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 GALK1P51570 392 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 CCNG2Q16589 344 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ZNF792Q3KQV3 632 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 KLC3Q6P597 504 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 DCUN1D2Q6PH85 259 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 USP50Q70EL3 339 aaPredicted RBP9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 EXOC8Q8IYI6 725 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 VPS52Q8N1B4 723 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 STKLD1Q8NE28 680 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 JOSD2Q8TAC2 188 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 AFG1LQ8WV93 481 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 INPP5DQ92835 1189 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 UPF1Q92900 1129 aaKnown RBP eCLIP9.41□□□□□ -0.93e-10■■■■■ 80.4
AL049839.2-201ENST00000553947 AZIN2Q96A70 460 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 SLITRK1Q96PX8 696 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 NR1H4Q96RI1 486 aaPredicted RBP9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 SMYD3Q9H7B4 428 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 RPF1Q9H9Y2 349 aaKnown RBP9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 DDX18Q9NVP1 670 aaKnown RBP9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 PCDHGC3Q9UN70 934 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 A0A0J9YVX5 310 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ASB14A6NK59 587 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 FOXO6A8MYZ6 492 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 GOLGA8SH3BPF8 625 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 KRT1P04264 644 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ITGB3P05106 788 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ATF7P17544 494 aaPredicted RBP9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ADORA2AP29274 412 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 RFC1P35251 1148 aaPredicted RBP9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 AUHQ13825 339 aaKnown RBP9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ZFYVE27Q5T4F4 411 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 LDLRAD1Q5T700 205 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 RFWD3Q6PCD5 774 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 NANOGNBQ7Z5D8 188 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 KIAA0319LQ8IZA0 1049 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 ARFGAP1Q8N6T3 406 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 LINC01465Q8N7H1 131 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 SMYD1Q8NB12 490 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 NAT14Q8WUY8 206 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 SMC6Q96SB8 1091 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 SYT17Q9BSW7 474 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 PDZD7Q9H5P4 517 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 DNPEPQ9ULA0 475 aa9.41□□□□□ -0.9
AL049839.2-201ENST00000553947 GAS8O95995 478 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 ZSCAN5DPP0CG00 497 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 ETS1P14921 441 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 ATF2P15336 505 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 COG7P83436 770 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 SNAPC2Q13487 334 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 KYNUQ16719 465 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 DSTYKQ6XUX3 929 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 MARK2Q7KZI7 788 aaKnown RBP9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 CYP4X1Q8N118 509 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 SHCBP1Q8NEM2 672 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 PPP1R13LQ8WUF5 828 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 NRG4Q8WWG1 115 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 CKAP2Q8WWK9 683 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 HAPLN3Q96S86 360 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 BCO2Q9BYV7 579 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 ELOVL4Q9GZR5 314 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 CXCL16Q9H2A7 254 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 PRKAG3Q9UGI9 489 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 TBK1Q9UHD2 729 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 ANAPC5Q9UJX4 755 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 MAGEB3O15480 346 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 TBX10O75333 385 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 BAG2O95816 211 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 ARF4P18085 180 aaPredicted RBP9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 KLRC2P26717 231 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 NEK3P51956 506 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 SLC10A6Q3KNW5 377 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 TNFAIP8L3Q5GJ75 292 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 ZNF667Q5HYK9 610 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 ZNF484Q5JVG2 852 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 SPOCD1Q6ZMY3 1216 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 SYDE1Q6ZW31 735 aaPredicted RBP9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 RCOR2Q8IZ40 523 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 EMC1Q8N766 993 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 SLC4A11Q8NBS3 891 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 GRK7Q8WTQ7 553 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 CPXM1Q96SM3 734 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 C16orf70Q9BSU1 422 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 TMEM109Q9BVC6 243 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 KATNBL1Q9H079 304 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 ZNF408Q9H9D4 720 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 PFDN4Q9NQP4 134 aa9.4□□□□□ -0.9
AL049839.2-201ENST00000553947 PRMT7Q9NVM4 692 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms