RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PRDM16Q9HAZ2 1276 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 HOMER2Q9NSB8 354 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 MED16Q9Y2X0 877 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 IFITM10A6NMD0 228 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 LACTBL1A8MY62 500 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 M0R3H8 397 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 CES2O00748 559 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 NGFRP08138 427 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 TGFB3P10600 412 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 SLC11A2P49281 568 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 GUCY2FP51841 1108 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 TBX4P57082 545 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 YPEL5P62699 121 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 B4GALNT1Q00973 533 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 ITKQ08881 620 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 ZNF750Q32MQ0 723 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 EARS2Q5JPH6 523 aaKnown RBP2.89□□□□□ -1.95
SRP54-204ENST00000553923 TMEM63BQ5T3F8 832 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 TMEM65Q6PI78 240 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 USP45Q70EL2 814 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 MAFAQ8NHW3 353 aaPredicted RBP2.89□□□□□ -1.95
SRP54-204ENST00000553923 BRIX1Q8TDN6 353 aaKnown RBP2.89□□□□□ -1.95
SRP54-204ENST00000553923 UBE2Q2Q8WVN8 375 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 DNASE2BQ8WZ79 361 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 NR4A3Q92570 626 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 TNKSO95271 1327 aa2.89□□□□□ -1.95
SRP54-204ENST00000553923 TRIP12Q14669 1992 aaPredicted RBP2.89□□□□□ -1.95
SRP54-204ENST00000553923 ZNF814B7Z6K7 855 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 FOXN3O00409 490 aaPredicted RBP2.88□□□□□ -1.95
SRP54-204ENST00000553923 SPRY2O43597 315 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 POU2F2P09086 479 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 SUMO2P61956 95 aaKnown RBP2.88□□□□□ -1.95
SRP54-204ENST00000553923 HSF1Q00613 529 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 BIRC2Q13490 618 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 PTCHD3Q3KNS1 767 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 SLC9C1Q4G0N8 1177 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 ZNF324BQ6AW86 544 aaPredicted RBP2.88□□□□□ -1.95
SRP54-204ENST00000553923 PPP4R4Q6NUP7 873 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 DCDC5Q6ZRR9 648 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 MIER2Q8N344 545 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 TMEM171Q8WVE6 324 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 ASB5Q8WWX0 329 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 MRGPRX1Q96LB2 322 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 TMEM204Q9BSN7 226 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 GJB4Q9NTQ9 266 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 SELENONQ9NZV5 590 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 PCDHA6Q9UN73 950 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 TMX2Q9Y320 296 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 EID1Q9Y6B2 187 aa2.88□□□□□ -1.95
SRP54-204ENST00000553923 A0A087WWL8 130 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 PRSS47A8MTI9 375 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 H3BUI4 141 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 KATNA1O75449 491 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 EPN2O95208 641 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 THP07101 528 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 ARRB2P32121 409 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 BCAT1P54687 386 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 RHBDL3P58872 404 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 OS9Q13438 667 aaPredicted RBP2.87□□□□□ -1.95
SRP54-204ENST00000553923 STIM1Q13586 685 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 ASIC2Q16515 512 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 PTPN21Q16825 1174 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 MGAT5BQ3V5L5 792 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 KHDC1LQ5JSQ8 128 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 C9orf50Q5SZB4 431 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 RAVER1Q8IY67 606 aaKnown RBP2.87□□□□□ -1.95
SRP54-204ENST00000553923 BPIFB1Q8TDL5 484 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 WFIKKN2Q8TEU8 576 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 TSR2Q969E8 191 aaKnown RBP2.87□□□□□ -1.95
SRP54-204ENST00000553923 SLC25A28Q96A46 364 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 SLC35A4Q96G79 324 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 MEIS3Q99687 375 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 MRPL44Q9H9J2 332 aaKnown RBP2.87□□□□□ -1.95
SRP54-204ENST00000553923 GBA2Q9HCG7 927 aaPredicted RBP2.87□□□□□ -1.95
SRP54-204ENST00000553923 MLXIPLQ9NP71 852 aa2.87□□□□□ -1.95
SRP54-204ENST00000553923 DRG1Q9Y295 367 aaKnown RBP2.87□□□□□ -1.95
SRP54-204ENST00000553923 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.87□□□□□ -1.95
SRP54-204ENST00000553923 A0A087WYN8 130 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 NTN3O00634 580 aaPredicted RBP2.86□□□□□ -1.95
SRP54-204ENST00000553923 TLX3O43711 291 aaPredicted RBP2.86□□□□□ -1.95
SRP54-204ENST00000553923 CREB3O43889 395 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 PLIN1O60240 522 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 DTNBO60941 627 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 EIF3JO75822 258 aaKnown RBP2.86□□□□□ -1.95
SRP54-204ENST00000553923 XRCC6P12956 609 aaKnown RBP eCLIP2.86□□□□□ -1.95
SRP54-204ENST00000553923 HOXB2P14652 356 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 CCND1P24385 295 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 CDKN1CP49918 316 aaPredicted RBP2.86□□□□□ -1.95
SRP54-204ENST00000553923 CFHR3Q02985 330 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 SLC14A1Q13336 389 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 MLC1Q15049 377 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 BRDTQ58F21 947 aaPredicted RBP2.86□□□□□ -1.95
SRP54-204ENST00000553923 VSTM1Q6UX27 236 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 RBM23Q86U06 439 aaKnown RBP2.86□□□□□ -1.95
SRP54-204ENST00000553923 TMPRSS12Q86WS5 348 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 RAB11FIP4Q86YS3 637 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 SMC5Q8IY18 1101 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 PLBD2Q8NHP8 589 aa2.86□□□□□ -1.95
SRP54-204ENST00000553923 MSI2Q96DH6 328 aaKnown RBP2.86□□□□□ -1.95
SRP54-204ENST00000553923 EDC3Q96F86 508 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms